Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.82□□□□□ -1.8
Ccdc38Q8CDN8 Gm23104-201ENSMUST00000083722 104 ntBASIC3.82□□□□□ -1.8
Ccdc38Q8CDN8 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc38Q8CDN8 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.82□□□□□ -1.8
Ccdc38Q8CDN8 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.82□□□□□ -1.8
Ccdc38Q8CDN8 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm24340-201ENSMUST00000104208 97 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm22676-201ENSMUST00000116972 129 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm12125-201ENSMUST00000117261 736 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm14975-201ENSMUST00000118741 664 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm14517-201ENSMUST00000119040 337 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm14607-201ENSMUST00000119119 491 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm14578-201ENSMUST00000122166 391 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm25105-201ENSMUST00000122477 130 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm25860-201ENSMUST00000158252 126 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm26365-201ENSMUST00000179177 94 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm37989-201ENSMUST00000195202 803 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm44583-201ENSMUST00000207478 281 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm45778-201ENSMUST00000211959 153 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm22864-201ENSMUST00000083950 130 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.81□□□□□ -1.8
Ccdc38Q8CDN8 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Mir706-201ENSMUST00000102262 84 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm14537-201ENSMUST00000117464 599 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm15014-201ENSMUST00000120742 258 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm14600-201ENSMUST00000121032 630 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm11414-201ENSMUST00000121795 263 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm22478-201ENSMUST00000122570 154 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm23540-201ENSMUST00000157543 164 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm22840-201ENSMUST00000158444 136 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm23387-201ENSMUST00000158586 107 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Mir6401-201ENSMUST00000184499 109 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Mir6914-201ENSMUST00000184999 69 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm6510-201ENSMUST00000195916 574 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Gm8249-201ENSMUST00000219225 465 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc38Q8CDN8 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm15783-201ENSMUST00000117521 633 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm9157-201ENSMUST00000117673 225 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm13167-201ENSMUST00000118554 578 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm8260-201ENSMUST00000119230 353 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm14656-201ENSMUST00000120342 502 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm5473-201ENSMUST00000179326 642 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Mir6405-201ENSMUST00000184584 124 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm20811-201ENSMUST00000190500 553 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm28552-201ENSMUST00000190725 388 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.79□□□□□ -1.8
Ccdc38Q8CDN8 Gm9632-201ENSMUST00000195934 643 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms