Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm25126-201ENSMUST00000083343 102 ntBASIC4.42□□□□□ -1.7
Trerf1Q8BXJ2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Trerf1Q8BXJ2 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trerf1Q8BXJ2 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.42□□□□□ -1.7
Trerf1Q8BXJ2 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.42□□□□□ -1.7
Trerf1Q8BXJ2 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm12891-201ENSMUST00000119358 240 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm12819-201ENSMUST00000122223 629 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm10444-201ENSMUST00000126708 148 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm21758-201ENSMUST00000179336 819 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm23648-201ENSMUST00000180301 107 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Mir6960-201ENSMUST00000183449 61 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm6802-202ENSMUST00000186566 126 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm28615-201ENSMUST00000187527 482 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm28661-201ENSMUST00000188231 681 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm29647-201ENSMUST00000188795 666 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm28504-201ENSMUST00000190977 666 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm31511-201ENSMUST00000193134 657 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm35843-201ENSMUST00000193716 666 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm42828-201ENSMUST00000199669 469 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm29754-201ENSMUST00000206269 358 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm44946-201ENSMUST00000208425 572 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm19032-201ENSMUST00000208584 592 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm23506-201ENSMUST00000083077 107 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.41□□□□□ -1.7
Trerf1Q8BXJ2 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.4□□□□□ -1.7
Trerf1Q8BXJ2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.4□□□□□ -1.7
Trerf1Q8BXJ2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.4□□□□□ -1.7
Trerf1Q8BXJ2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.4□□□□□ -1.7
Trerf1Q8BXJ2 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm23178-201ENSMUST00000116782 95 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm12884-201ENSMUST00000120371 325 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm13973-201ENSMUST00000121371 894 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm11438-201ENSMUST00000121582 189 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm13602-201ENSMUST00000122405 493 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm23789-201ENSMUST00000122536 301 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm20462-201ENSMUST00000172623 408 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm20526-201ENSMUST00000173416 158 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm27676-201ENSMUST00000183669 61 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm28474-201ENSMUST00000188501 315 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm43370-201ENSMUST00000196437 284 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm19649-201ENSMUST00000201126 822 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm7380-201ENSMUST00000211599 466 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm45439-201ENSMUST00000211723 359 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.4□□□□□ -1.71
Trerf1Q8BXJ2 Gm22977-201ENSMUST00000082615 107 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms