Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm24757-201ENSMUST00000176987 371 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm43026-201ENSMUST00000202972 325 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm23988-201ENSMUST00000117034 122 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm14594-201ENSMUST00000118052 537 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm14590-201ENSMUST00000118934 537 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm12755-201ENSMUST00000122297 282 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm24059-201ENSMUST00000157493 312 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm24192-201ENSMUST00000157978 145 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm24850-201ENSMUST00000158029 119 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm22116-201ENSMUST00000158791 141 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm22501-201ENSMUST00000158981 127 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm18953-201ENSMUST00000175694 300 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm14596-201ENSMUST00000180268 537 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm14595-201ENSMUST00000180335 537 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm17946-201ENSMUST00000186856 538 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm8747-201ENSMUST00000195392 751 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm43368-201ENSMUST00000200638 409 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm19908-201ENSMUST00000204684 391 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm35558-203ENSMUST00000222264 204 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm22423-201ENSMUST00000082861 184 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm23678-201ENSMUST00000083157 107 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm23461-201ENSMUST00000083265 107 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm7381-201ENSMUST00000098958 300 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp40Q8BWR4 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm14299-201ENSMUST00000117586 397 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm12760-201ENSMUST00000117861 482 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm15141-201ENSMUST00000121860 729 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm9225-201ENSMUST00000121921 836 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm25058-201ENSMUST00000157365 128 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm26148-201ENSMUST00000157430 68 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm28724-202ENSMUST00000194218 295 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm43730-201ENSMUST00000199863 372 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm44857-201ENSMUST00000208331 196 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm45539-201ENSMUST00000210313 428 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm10916-201ENSMUST00000080330 483 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm24144-201ENSMUST00000082632 111 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Gm23679-201ENSMUST00000083161 119 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Usp40Q8BWR4 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms