Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm28030-201ENSMUST00000184987 138 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm28439-201ENSMUST00000187714 876 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm24928-201ENSMUST00000083399 107 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm25897-201ENSMUST00000083709 107 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.65□□□□□ -1.82
Ccdc40Q8BI79 Gm6913-201ENSMUST00000100019 348 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Mir690-201ENSMUST00000102110 109 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Mir599-201ENSMUST00000102378 88 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm12782-201ENSMUST00000117519 727 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm7363-201ENSMUST00000119883 399 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm13574-201ENSMUST00000120482 394 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm26349-201ENSMUST00000157530 130 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm25120-201ENSMUST00000180148 79 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm27163-201ENSMUST00000184767 409 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm42832-201ENSMUST00000196361 745 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm45327-201ENSMUST00000211612 565 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm7751-201ENSMUST00000212868 709 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Ccdc40Q8BI79 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm12492-201ENSMUST00000117665 564 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm12889-201ENSMUST00000118684 241 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm22789-201ENSMUST00000157884 130 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm16101-201ENSMUST00000160695 430 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Mir3106-201ENSMUST00000175401 82 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm26365-201ENSMUST00000179177 94 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm3454-201ENSMUST00000185571 412 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm35931-201ENSMUST00000203931 448 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm44513-201ENSMUST00000206811 439 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm21089-201ENSMUST00000215843 325 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm22043-201ENSMUST00000082993 158 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc40Q8BI79 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm649-201ENSMUST00000117284 1054 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm14554-201ENSMUST00000119548 661 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm23183-201ENSMUST00000122595 323 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm25438-201ENSMUST00000158281 110 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Mir5136-201ENSMUST00000175573 76 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm28623-201ENSMUST00000187219 192 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc40Q8BI79 Gm37428-201ENSMUST00000193886 137 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms