Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23750-201ENSMUST00000104222 132 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm15106-201ENSMUST00000119691 821 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm11677-201ENSMUST00000121349 977 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm15428-201ENSMUST00000121352 333 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm25637-201ENSMUST00000157529 107 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm26041-201ENSMUST00000158148 108 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Scarna13-201ENSMUST00000158164 275 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm25362-201ENSMUST00000158854 105 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm22326-201ENSMUST00000158897 351 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Mir5129-201ENSMUST00000174938 78 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm26400-201ENSMUST00000175012 85 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm27477-201ENSMUST00000184649 143 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm28429-201ENSMUST00000188521 363 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm2147-201ENSMUST00000193588 639 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm42621-201ENSMUST00000198114 275 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm25139-201ENSMUST00000083247 210 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.24□□□□□ -1.57
Ubp1Q811S7 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ubp1Q811S7 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm11481-201ENSMUST00000120069 255 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm11584-201ENSMUST00000120636 325 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm11825-201ENSMUST00000120710 736 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm12779-201ENSMUST00000121496 143 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm15075-201ENSMUST00000122187 477 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm5401-201ENSMUST00000122444 365 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm24191-201ENSMUST00000157977 122 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm29330-201ENSMUST00000190032 699 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm6056-201ENSMUST00000221253 488 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 AC138401.1-201ENSMUST00000221533 116 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm9269-201ENSMUST00000221661 578 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm23972-201ENSMUST00000083322 165 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Gm25207-201ENSMUST00000093745 107 ntBASIC5.23□□□□□ -1.57
Ubp1Q811S7 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Ubp1Q811S7 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm13250-201ENSMUST00000117209 753 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm15803-201ENSMUST00000120118 394 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm12110-201ENSMUST00000121601 579 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm5123-201ENSMUST00000121905 837 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm22106-201ENSMUST00000122544 127 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm5755-201ENSMUST00000152394 837 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm23250-201ENSMUST00000157444 267 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm26489-201ENSMUST00000157880 264 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm9022-202ENSMUST00000183285 483 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Mir7037-201ENSMUST00000184414 65 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm29062-201ENSMUST00000186032 694 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm42832-201ENSMUST00000196361 745 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.22□□□□□ -1.57
Ubp1Q811S7 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms