Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm24670-201ENSMUST00000104154 132 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm13329-201ENSMUST00000117063 265 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm25806-201ENSMUST00000122782 122 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm26585-201ENSMUST00000180890 630 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm20074-201ENSMUST00000208144 484 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm45551-201ENSMUST00000211459 928 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Rpap1Q80TE0 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm24120-201ENSMUST00000103978 129 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm8260-201ENSMUST00000119230 353 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm22730-201ENSMUST00000158085 171 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Mir3075-201ENSMUST00000175340 85 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm25820-202ENSMUST00000197479 128 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm8209-201ENSMUST00000206386 553 ntBASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rpap1Q80TE0 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm13314-201ENSMUST00000118742 335 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm14876-201ENSMUST00000120795 327 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm27369-201ENSMUST00000185182 71 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm28923-201ENSMUST00000187755 322 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Gm18026-201ENSMUST00000222789 727 ntBASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rpap1Q80TE0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm11387-201ENSMUST00000120266 772 ntBASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm11363-201ENSMUST00000121672 548 ntBASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm8580-201ENSMUST00000160295 464 ntBASIC4.19□□□□□ -1.74
Rpap1Q80TE0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Snora23-201ENSMUST00000082517 184 ntBASIC4.19□□□□□ -1.74
Rpap1Q80TE0 Gm9427-201ENSMUST00000116187 651 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm13349-201ENSMUST00000118436 411 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm15195-201ENSMUST00000118775 263 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm11943-201ENSMUST00000119473 327 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm6574-201ENSMUST00000120037 362 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm23889-201ENSMUST00000122689 104 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm3757-201ENSMUST00000125878 675 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm22534-201ENSMUST00000158173 104 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm43655-201ENSMUST00000197367 222 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm43379-201ENSMUST00000196253 7726 ntBASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Rpap1Q80TE0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm13880-201ENSMUST00000118421 474 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm13751-201ENSMUST00000120280 752 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm24082-201ENSMUST00000175175 83 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm21006-201ENSMUST00000196930 667 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm23738-201ENSMUST00000082828 171 ntBASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Rpap1Q80TE0 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Gm24890-201ENSMUST00000104389 102 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Gm44715-201ENSMUST00000209049 3839 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Gm18617-201ENSMUST00000222311 259 ntBASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rpap1Q80TE0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Rpap1Q80TE0 Gm22361-201ENSMUST00000158435 176 ntBASIC4.15□□□□□ -1.74
Rpap1Q80TE0 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Rpap1Q80TE0 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Rpap1Q80TE0 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Rpap1Q80TE0 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms