Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm13728-201ENSMUST00000117471 400 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm14880-201ENSMUST00000117581 292 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm12173-201ENSMUST00000117622 273 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm5123-201ENSMUST00000121905 837 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm25784-201ENSMUST00000122524 81 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm5755-201ENSMUST00000152394 837 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm22156-201ENSMUST00000158409 141 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm24664-201ENSMUST00000158939 100 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm27317-201ENSMUST00000183533 95 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm28118-201ENSMUST00000185957 294 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm43708-201ENSMUST00000198857 961 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm42164-201ENSMUST00000198881 379 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm44720-201ENSMUST00000206076 260 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm44923-201ENSMUST00000206673 85 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm44650-201ENSMUST00000206929 194 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm39197-201ENSMUST00000212069 457 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm9068-201ENSMUST00000217393 455 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm17890-201ENSMUST00000221419 757 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC154245.1-201ENSMUST00000224615 601 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm23510-201ENSMUST00000083083 163 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Mir202-201ENSMUST00000083568 72 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Mir504-201ENSMUST00000093602 79 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.15□□□□□ -1.74
Ubfd1Q78JW9 Gm22758-201ENSMUST00000102275 96 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm23226-201ENSMUST00000116927 103 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm26348-201ENSMUST00000157528 240 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm23591-201ENSMUST00000157663 286 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm24968-201ENSMUST00000179817 107 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm26960-201ENSMUST00000182263 412 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm26968-201ENSMUST00000182894 481 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm29634-201ENSMUST00000188467 696 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm29647-201ENSMUST00000188795 666 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm28699-201ENSMUST00000189193 696 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm28504-201ENSMUST00000190977 666 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm18900-201ENSMUST00000193218 584 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm37300-201ENSMUST00000193327 280 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm35843-201ENSMUST00000193716 666 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm44354-201ENSMUST00000196017 143 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm43855-201ENSMUST00000197462 507 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm44583-201ENSMUST00000207478 281 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm44910-201ENSMUST00000208451 396 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm45523-201ENSMUST00000210712 799 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm46194-201ENSMUST00000218136 320 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ubfd1Q78JW9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm23319-201ENSMUST00000104467 131 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm11367-201ENSMUST00000117802 120 ntBASIC4.14□□□□□ -1.75
Ubfd1Q78JW9 Gm5060-201ENSMUST00000120072 599 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms