Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rnf220Q6PDX6 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.4□□□□□ -1.71
Rnf220Q6PDX6 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm11576-201ENSMUST00000117433 417 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm11408-201ENSMUST00000117889 519 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm13550-201ENSMUST00000118185 525 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm8595-201ENSMUST00000118250 630 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm15357-201ENSMUST00000119160 285 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm12806-201ENSMUST00000119384 268 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm16254-201ENSMUST00000131528 730 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm24240-201ENSMUST00000157785 135 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Mir1963-201ENSMUST00000158594 59 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm7266-201ENSMUST00000187999 405 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm28299-201ENSMUST00000189908 339 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm36939-201ENSMUST00000194889 439 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm18971-201ENSMUST00000197240 374 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm43144-201ENSMUST00000198256 485 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm43968-201ENSMUST00000203388 389 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm44149-201ENSMUST00000204256 226 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm5001-201ENSMUST00000204361 331 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm44961-201ENSMUST00000207450 196 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm45387-201ENSMUST00000209792 632 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm45317-201ENSMUST00000210385 223 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr151-202ENSMUST00000221099 929 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm26163-201ENSMUST00000083792 178 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rnf220Q6PDX6 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm24831-201ENSMUST00000116778 126 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm11912-201ENSMUST00000117235 264 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm14304-201ENSMUST00000117272 446 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm11784-201ENSMUST00000118568 474 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm14714-201ENSMUST00000119743 439 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm7071-201ENSMUST00000120458 462 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm8061-201ENSMUST00000122380 350 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm22343-201ENSMUST00000122648 286 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm22849-201ENSMUST00000157713 307 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm17044-201ENSMUST00000168549 828 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Mir3097-201ENSMUST00000175356 67 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm28429-201ENSMUST00000188521 363 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm43424-201ENSMUST00000200484 253 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm45438-201ENSMUST00000210242 564 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Gm23515-201ENSMUST00000082829 107 ntBASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf220Q6PDX6 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms