Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm27254-201ENSMUST00000183926 517 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm29227-201ENSMUST00000187139 315 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm29034-201ENSMUST00000188099 315 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm9775-201ENSMUST00000189402 331 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm38060-201ENSMUST00000194822 464 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm37129-201ENSMUST00000195791 315 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm7721-201ENSMUST00000200446 546 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm29793-201ENSMUST00000202874 460 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm45200-201ENSMUST00000207434 919 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm45185-201ENSMUST00000207556 404 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm24706-201ENSMUST00000082806 137 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm23972-201ENSMUST00000083322 165 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cpsf6Q6NVF9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Mir879-201ENSMUST00000104703 76 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm12901-201ENSMUST00000118690 532 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm14591-201ENSMUST00000120407 518 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm13725-201ENSMUST00000122139 207 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm23078-201ENSMUST00000157848 148 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm26490-201ENSMUST00000157879 140 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm23318-201ENSMUST00000158000 108 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm24858-201ENSMUST00000158058 323 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm23262-201ENSMUST00000158323 168 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm24001-201ENSMUST00000158463 85 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm10319-202ENSMUST00000159439 846 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm5263-201ENSMUST00000163646 601 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Mir6921-201ENSMUST00000183719 80 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm38183-201ENSMUST00000193189 205 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm17954-201ENSMUST00000195893 607 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm18306-201ENSMUST00000207338 569 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm45207-201ENSMUST00000207469 145 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm8745-201ENSMUST00000207846 782 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm7128-201ENSMUST00000211639 533 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm25801-201ENSMUST00000082638 106 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm22974-201ENSMUST00000083301 103 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm8822-201ENSMUST00000118948 2347 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Cpsf6Q6NVF9 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms