Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm23667-201ENSMUST00000157466 120 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21842-201ENSMUST00000177552 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21626-201ENSMUST00000177791 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21562-201ENSMUST00000177888 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21539-201ENSMUST00000177925 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21599-201ENSMUST00000178249 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21914-201ENSMUST00000178452 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21723-201ENSMUST00000178692 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21916-201ENSMUST00000178771 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm4479-201ENSMUST00000178807 171 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21801-201ENSMUST00000178865 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21633-201ENSMUST00000178941 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17412-201ENSMUST00000179261 468 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21821-201ENSMUST00000179646 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21588-201ENSMUST00000180074 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21780-201ENSMUST00000180128 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21572-201ENSMUST00000180134 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm21529-201ENSMUST00000180175 498 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm7870-201ENSMUST00000184467 616 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm29259-201ENSMUST00000186396 694 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm29370-202ENSMUST00000187476 499 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm19030-201ENSMUST00000194947 552 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm20039-201ENSMUST00000210329 394 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm9765-201ENSMUST00000043170 321 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm23847-201ENSMUST00000083829 110 ntBASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Tpm4Q6IRU2 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm13349-201ENSMUST00000118436 411 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm23895-201ENSMUST00000158108 160 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm27783-201ENSMUST00000183534 105 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm7540-201ENSMUST00000219764 926 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Mir27a-201ENSMUST00000083510 87 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm24917-201ENSMUST00000083935 104 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm14448-201ENSMUST00000116383 210 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm12230-201ENSMUST00000118301 454 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm4910-201ENSMUST00000119605 366 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm16445-201ENSMUST00000120399 714 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm12880-201ENSMUST00000120652 494 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm42438-201ENSMUST00000197832 974 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm44964-201ENSMUST00000207011 273 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm44824-201ENSMUST00000207021 229 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm8681-201ENSMUST00000219115 618 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms