Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.18□□□□□ -2.06
Col7a1Q63870 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col7a1Q63870 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm43083-201ENSMUST00000199594 476 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm43651-201ENSMUST00000199796 439 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm14125-201ENSMUST00000113442 680 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm37111-201ENSMUST00000193250 634 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col7a1Q63870 Gm9818-201ENSMUST00000050900 255 ntBASIC2.17□□□□□ -2.06
Col7a1Q63870 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Col7a1Q63870 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.16□□□□□ -2.06
Col7a1Q63870 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm26922-201ENSMUST00000082687 72 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col7a1Q63870 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm15159-201ENSMUST00000117062 764 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm27443-201ENSMUST00000184660 98 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm29668-201ENSMUST00000187802 315 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Trbv27-201ENSMUST00000193711 277 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm18330-201ENSMUST00000199246 547 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm44030-201ENSMUST00000204865 432 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm45498-201ENSMUST00000210346 283 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm5917-201ENSMUST00000217638 721 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.16□□□□□ -2.06
Col7a1Q63870 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col7a1Q63870 BC055308-201ENSMUST00000193380 2538 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 BC022960-201ENSMUST00000119987 1815 ntBASIC2.16□□□□□ -2.06
Col7a1Q63870 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col7a1Q63870 Gm9225-201ENSMUST00000121921 836 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm25456-201ENSMUST00000157952 109 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Mir3968-201ENSMUST00000175355 100 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm43601-201ENSMUST00000196294 945 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC2.15□□□□□ -2.06
Col7a1Q63870 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Col7a1Q63870 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm18871-201ENSMUST00000218655 745 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm18704-201ENSMUST00000219736 446 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC2.15□□□□□ -2.06
Col7a1Q63870 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col7a1Q63870 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col7a1Q63870 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Col7a1Q63870 Gm8995-201ENSMUST00000184842 7280 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 AC124346.2-201ENSMUST00000217986 5083 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm23109-201ENSMUST00000116867 126 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm13756-201ENSMUST00000117618 222 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm13170-201ENSMUST00000119716 643 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm25460-201ENSMUST00000157954 127 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm24212-201ENSMUST00000158258 132 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm24638-201ENSMUST00000179807 132 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm43765-201ENSMUST00000196303 893 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm44849-201ENSMUST00000207595 484 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 AC154618.1-201ENSMUST00000227451 303 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm26458-201ENSMUST00000082832 128 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.15□□□□□ -2.07
Col7a1Q63870 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col7a1Q63870 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col7a1Q63870 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col7a1Q63870 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col7a1Q63870 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col7a1Q63870 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col7a1Q63870 Gm26077-201ENSMUST00000104064 123 ntBASIC2.14□□□□□ -2.07
Col7a1Q63870 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.14□□□□□ -2.07
Col7a1Q63870 Gm27700-201ENSMUST00000185003 81 ntBASIC2.14□□□□□ -2.07
Col7a1Q63870 Gm23347-201ENSMUST00000083823 82 ntBASIC2.14□□□□□ -2.07
Col7a1Q63870 Gm21286-201ENSMUST00000098035 545 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms