Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CtcfQ61164 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CtcfQ61164 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CtcfQ61164 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CtcfQ61164 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm14890-201ENSMUST00000117660 676 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm24289-201ENSMUST00000157629 135 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm26320-201ENSMUST00000157742 306 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm23215-201ENSMUST00000178153 121 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm6113-201ENSMUST00000180319 639 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28560-201ENSMUST00000186091 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28334-201ENSMUST00000186653 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28594-201ENSMUST00000187022 661 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm6501-201ENSMUST00000187178 916 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28495-201ENSMUST00000188452 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28232-201ENSMUST00000188683 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm28481-201ENSMUST00000189231 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm29059-201ENSMUST00000191534 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm37765-201ENSMUST00000192395 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm37237-201ENSMUST00000192893 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm37550-201ENSMUST00000193230 463 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm36968-201ENSMUST00000193737 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm37431-201ENSMUST00000195102 111 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm38290-201ENSMUST00000195238 315 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm44449-201ENSMUST00000203610 153 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm45523-201ENSMUST00000210712 799 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CtcfQ61164 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm25200-201ENSMUST00000083094 130 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CtcfQ61164 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CtcfQ61164 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CtcfQ61164 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CtcfQ61164 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CtcfQ61164 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CtcfQ61164 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm14899-201ENSMUST00000118673 548 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm12006-201ENSMUST00000120786 403 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm12900-201ENSMUST00000120919 573 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm13865-201ENSMUST00000120957 865 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm15379-201ENSMUST00000121224 648 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm22036-201ENSMUST00000157279 215 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.24□□□□□ -1.73
CtcfQ61164 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm8151-201ENSMUST00000184817 871 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm27414-201ENSMUST00000185033 381 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm18505-201ENSMUST00000187360 790 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms