Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm18338-201ENSMUST00000222381 560 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm9370-201ENSMUST00000222787 609 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm26437-201ENSMUST00000082595 105 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm25699-201ENSMUST00000082896 167 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm23460-201ENSMUST00000083258 109 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usf1Q61069 BC051076-202ENSMUST00000199477 2868 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm26145-201ENSMUST00000104476 127 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usf1Q61069 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm15108-201ENSMUST00000116160 803 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm12881-201ENSMUST00000121191 203 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm16458-201ENSMUST00000121428 502 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm15111-201ENSMUST00000122142 878 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm16327-201ENSMUST00000137146 228 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm23231-201ENSMUST00000157299 104 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm23668-201ENSMUST00000157465 111 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm24960-201ENSMUST00000157923 90 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm24111-201ENSMUST00000175491 97 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm22910-201ENSMUST00000178568 132 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm24019-201ENSMUST00000178620 107 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm26243-201ENSMUST00000179260 107 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm18384-201ENSMUST00000195974 808 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm43975-201ENSMUST00000203023 481 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm18540-201ENSMUST00000204025 526 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.17□□□□□ -1.9
Usf1Q61069 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm18225-201ENSMUST00000216708 742 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usf1Q61069 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Usf1Q61069 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm23296-201ENSMUST00000082555 107 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Gm24859-201ENSMUST00000082729 107 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Snord35b-201ENSMUST00000082833 87 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Usf1Q61069 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Usf1Q61069 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Usf1Q61069 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.17□□□□□ -1.9
Usf1Q61069 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Usf1Q61069 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Usf1Q61069 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Usf1Q61069 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm12467-201ENSMUST00000117625 745 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm12268-201ENSMUST00000118398 442 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm14599-201ENSMUST00000120469 474 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm13502-201ENSMUST00000121574 684 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm23591-201ENSMUST00000157663 286 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm17030-201ENSMUST00000167016 393 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm24969-201ENSMUST00000180331 79 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm28030-201ENSMUST00000184987 138 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Gm44348-201ENSMUST00000200165 122 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.16□□□□□ -1.9
Usf1Q61069 Gm35857-201ENSMUST00000212739 178 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.16□□□□□ -1.9
Usf1Q61069 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.16□□□□□ -1.9
Usf1Q61069 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms