Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm26701-201ENSMUST00000181571 234 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Mir6398-201ENSMUST00000184541 102 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Mir6363-201ENSMUST00000184880 114 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm28847-201ENSMUST00000186778 700 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm29365-201ENSMUST00000189461 699 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Mir3069-201ENSMUST00000198802 65 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 AC122924.1-201ENSMUST00000222044 163 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm5471-201ENSMUST00000072732 337 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 n-R5s173-201ENSMUST00000082620 119 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm26064-201ENSMUST00000083381 109 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm25765-201ENSMUST00000104100 132 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm24987-201ENSMUST00000104453 134 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm14299-201ENSMUST00000117586 397 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm14282-201ENSMUST00000119484 240 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm12495-201ENSMUST00000119750 447 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm16274-201ENSMUST00000139251 592 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm17538-201ENSMUST00000168236 327 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm18128-201ENSMUST00000172625 511 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm38046-201ENSMUST00000192733 550 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm37001-201ENSMUST00000193377 190 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm6510-201ENSMUST00000195916 574 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm44099-201ENSMUST00000203299 112 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm44332-201ENSMUST00000203712 433 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm20946-201ENSMUST00000212367 461 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 AC107453.2-201ENSMUST00000227714 655 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm44800-201ENSMUST00000207510 1855 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm3089-201ENSMUST00000200804 1395 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm3302-201ENSMUST00000201462 1395 ntBASIC1.85□□□□□ -2.11
Trav3-1Q5R1I8 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm14811-201ENSMUST00000117070 117 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm9157-201ENSMUST00000117673 225 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm14581-201ENSMUST00000121726 198 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm25107-201ENSMUST00000122472 129 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm25104-201ENSMUST00000122476 163 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm25965-201ENSMUST00000157170 93 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm23906-201ENSMUST00000157573 128 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm29602-201ENSMUST00000186887 442 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm19280-201ENSMUST00000190191 205 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm9931-201ENSMUST00000193584 1185 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm45608-201ENSMUST00000210948 389 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm18346-201ENSMUST00000216782 325 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm19195-201ENSMUST00000222018 511 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 CT573085.1-201ENSMUST00000224279 1197 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 CT025689.2-201ENSMUST00000224979 429 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 AC125223.1-203ENSMUST00000225304 498 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm24525-201ENSMUST00000082917 151 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Gm23264-201ENSMUST00000083372 107 ntBASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav3-1Q5R1I8 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav3-1Q5R1I8 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms