Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Gm25203-201ENSMUST00000082842 215 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Mir184-201ENSMUST00000083662 69 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.58□□□□□ -2
Trav5d-4Q5R1F6 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm24890-201ENSMUST00000104389 102 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm24831-201ENSMUST00000116778 126 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm25224-201ENSMUST00000158195 68 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm22521-201ENSMUST00000158272 134 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm25525-201ENSMUST00000177701 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm26178-201ENSMUST00000177706 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm26465-201ENSMUST00000178517 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm24317-201ENSMUST00000178536 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm4479-201ENSMUST00000178807 171 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm25021-201ENSMUST00000179184 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm22995-201ENSMUST00000179670 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm24424-201ENSMUST00000179714 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm24389-201ENSMUST00000179962 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm25672-201ENSMUST00000180111 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm29259-201ENSMUST00000186396 694 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm29163-201ENSMUST00000188029 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm43932-201ENSMUST00000204499 52 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm44157-201ENSMUST00000204720 410 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm8681-201ENSMUST00000219115 618 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm19563-201ENSMUST00000222031 270 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm23815-201ENSMUST00000083231 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm23850-201ENSMUST00000083830 169 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm23520-201ENSMUST00000093736 107 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Trav5d-4Q5R1F6 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm14564-201ENSMUST00000122159 294 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm15116-201ENSMUST00000122248 663 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm14389-201ENSMUST00000140453 241 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm22766-201ENSMUST00000158372 99 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm26297-201ENSMUST00000179464 132 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm7909-201ENSMUST00000182688 614 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm27796-201ENSMUST00000183863 261 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm27233-201ENSMUST00000184030 307 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm28628-201ENSMUST00000187006 264 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm28629-201ENSMUST00000187309 263 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm32340-201ENSMUST00000192883 259 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm37193-201ENSMUST00000193087 513 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm37817-201ENSMUST00000195276 434 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm8023-201ENSMUST00000195298 903 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm44513-201ENSMUST00000206811 439 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Gm45273-201ENSMUST00000211559 281 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.56□□□□□ -2
Trav5d-4Q5R1F6 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Mir693-201ENSMUST00000102187 89 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Mir294-201ENSMUST00000104710 84 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm14518-201ENSMUST00000117351 542 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm11577-201ENSMUST00000118030 737 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms