Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm43088-201ENSMUST00000197530 2347 ntBASIC9.09□□□□□ -0.95
Trim41Q5NCC3 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trim41Q5NCC3 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC9.09□□□□□ -0.96
Trim41Q5NCC3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm43736-201ENSMUST00000196377 2281 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm44894-201ENSMUST00000205280 2174 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm23424-201ENSMUST00000103889 110 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 n-R5s67-201ENSMUST00000104336 114 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm13967-201ENSMUST00000120404 380 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm26278-201ENSMUST00000157098 132 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Mir3112-201ENSMUST00000175431 82 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm27997-201ENSMUST00000184942 69 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm25207-201ENSMUST00000093745 107 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm43663-201ENSMUST00000198643 1505 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm37018-201ENSMUST00000192441 3869 ntBASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trim41Q5NCC3 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm37916-201ENSMUST00000192153 2435 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23273-201ENSMUST00000104058 135 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22468-201ENSMUST00000116680 120 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm26248-201ENSMUST00000116700 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm26137-201ENSMUST00000116701 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm26190-201ENSMUST00000116704 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24617-201ENSMUST00000116705 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25778-201ENSMUST00000116713 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25774-201ENSMUST00000116717 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22102-201ENSMUST00000116730 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23177-201ENSMUST00000116784 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24193-201ENSMUST00000116801 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24744-201ENSMUST00000116833 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24427-201ENSMUST00000116896 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22346-201ENSMUST00000116918 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23606-201ENSMUST00000116938 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22029-201ENSMUST00000116940 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm26298-201ENSMUST00000116956 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23844-201ENSMUST00000116959 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24484-201ENSMUST00000117009 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25347-201ENSMUST00000117026 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22112-201ENSMUST00000117032 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25321-201ENSMUST00000122558 102 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22991-201ENSMUST00000178126 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25754-201ENSMUST00000178653 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm22419-201ENSMUST00000178780 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24802-201ENSMUST00000178897 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25208-201ENSMUST00000178964 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm24567-201ENSMUST00000179294 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23943-201ENSMUST00000179712 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm25228-201ENSMUST00000180121 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm23304-201ENSMUST00000180209 121 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm27410-201ENSMUST00000183851 115 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trim41Q5NCC3 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm15263-201ENSMUST00000121556 642 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm23391-201ENSMUST00000157579 104 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Scarna10-201ENSMUST00000158992 325 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm24520-201ENSMUST00000179510 110 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 BX530055.1-201ENSMUST00000197285 122 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Gm45002-201ENSMUST00000208045 120 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 AC125539.2-202ENSMUST00000227983 587 ntBASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim41Q5NCC3 AC129085.3-201ENSMUST00000225686 1705 ntBASIC9.05□□□□□ -0.96
Trim41Q5NCC3 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim41Q5NCC3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms