Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm19232-201ENSMUST00000211621 652 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm25202-201ENSMUST00000082838 191 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm22575-201ENSMUST00000082981 110 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm26121-201ENSMUST00000083364 162 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.38□□□□□ -1.87
Usp28Q5I043 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usp28Q5I043 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usp28Q5I043 BC051076-202ENSMUST00000199477 2868 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp28Q5I043 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm22339-201ENSMUST00000157718 62 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm37708-201ENSMUST00000192337 895 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm5309-201ENSMUST00000197416 677 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm34091-201ENSMUST00000200875 604 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm36776-201ENSMUST00000207006 203 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.37□□□□□ -1.87
Usp28Q5I043 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Snora23-201ENSMUST00000082517 184 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm26129-201ENSMUST00000082719 107 ntBASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp28Q5I043 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usp28Q5I043 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm14534-201ENSMUST00000120045 357 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm12587-201ENSMUST00000120180 427 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm12372-201ENSMUST00000121654 768 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm13471-201ENSMUST00000122057 433 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm13131-201ENSMUST00000122228 321 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm14905-201ENSMUST00000122351 639 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm23792-201ENSMUST00000122557 93 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm25520-201ENSMUST00000158389 118 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm16111-201ENSMUST00000162128 285 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm17164-201ENSMUST00000169013 506 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm20651-201ENSMUST00000177219 329 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm21809-201ENSMUST00000178495 468 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm26915-201ENSMUST00000183080 748 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm7634-201ENSMUST00000185778 553 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm28155-201ENSMUST00000191066 151 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm37002-201ENSMUST00000194560 373 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm31520-201ENSMUST00000203048 733 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm43932-201ENSMUST00000204499 52 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm44857-201ENSMUST00000208331 196 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usp28Q5I043 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm22304-201ENSMUST00000082688 129 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.36□□□□□ -1.87
Usp28Q5I043 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Usp28Q5I043 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm23256-201ENSMUST00000102235 110 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm26140-201ENSMUST00000103807 110 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm22019-201ENSMUST00000104359 96 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm12889-201ENSMUST00000118684 241 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm15946-201ENSMUST00000160654 423 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gm17194-201ENSMUST00000164610 348 ntBASIC3.35□□□□□ -1.87
Usp28Q5I043 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.35□□□□□ -1.87
Usp28Q5I043 Mir3106-201ENSMUST00000175401 82 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms