Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm37807-201ENSMUST00000194310 190 ntBASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Gm19080-201ENSMUST00000196082 550 ntBASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Snora36b-201ENSMUST00000104383 132 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm14607-201ENSMUST00000119119 491 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm22947-201ENSMUST00000158559 91 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm24885-201ENSMUST00000158783 270 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm19253-201ENSMUST00000204279 307 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.39□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm24670-201ENSMUST00000104154 132 ntBASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm14385-201ENSMUST00000116315 876 ntBASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm8935-201ENSMUST00000066794 2798 ntBASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Ccdc88bQ4QRL3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm13406-201ENSMUST00000121991 256 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm22378-201ENSMUST00000157481 111 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm45879-201ENSMUST00000212521 392 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm25553-201ENSMUST00000158076 79 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm16111-201ENSMUST00000162128 285 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm17893-201ENSMUST00000203017 770 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr844-201ENSMUST00000054106 930 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm9174-201ENSMUST00000078149 255 ntBASIC4.37□□□□□ -1.71
Ccdc88bQ4QRL3 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm45039-201ENSMUST00000209181 3477 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm26983-201ENSMUST00000182051 388 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm37751-201ENSMUST00000192440 1198 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm45474-201ENSMUST00000209471 408 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Gm25202-201ENSMUST00000082838 191 ntBASIC4.36□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm25113-201ENSMUST00000157185 143 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm24053-201ENSMUST00000158620 105 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Mir6406-201ENSMUST00000183592 120 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 AL603834.1-201ENSMUST00000198372 121 ntBASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc88bQ4QRL3 Gm37158-201ENSMUST00000191652 5704 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm13349-201ENSMUST00000118436 411 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm5263-201ENSMUST00000163646 601 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm27220-201ENSMUST00000183453 262 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm9696-202ENSMUST00000191541 830 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm43104-201ENSMUST00000197234 311 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm44161-201ENSMUST00000203532 253 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm44212-201ENSMUST00000205016 897 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.34□□□□□ -1.71
Ccdc88bQ4QRL3 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.34□□□□□ -1.72
Ccdc88bQ4QRL3 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.34□□□□□ -1.72
Ccdc88bQ4QRL3 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.34□□□□□ -1.72
Ccdc88bQ4QRL3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm23950-201ENSMUST00000104026 129 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm24210-201ENSMUST00000158263 133 ntBASIC4.33□□□□□ -1.72
Ccdc88bQ4QRL3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms