Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm24469-201ENSMUST00000104487 131 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm6664-201ENSMUST00000119138 468 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm15452-201ENSMUST00000119877 240 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm16458-201ENSMUST00000121428 502 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm26424-201ENSMUST00000122530 104 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm26312-201ENSMUST00000157769 165 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm24241-201ENSMUST00000157787 145 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm43070-201ENSMUST00000196938 415 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Trim40Q3UWA4 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm13273-201ENSMUST00000119737 159 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm14506-201ENSMUST00000121165 536 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm25386-201ENSMUST00000157814 288 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm24962-201ENSMUST00000157917 109 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm20701-201ENSMUST00000176082 347 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm27875-201ENSMUST00000184425 123 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm27477-201ENSMUST00000184649 143 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm20811-201ENSMUST00000190500 553 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm18692-201ENSMUST00000193047 511 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm38154-201ENSMUST00000195444 340 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm18100-201ENSMUST00000200897 452 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm44688-201ENSMUST00000209083 537 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm17829-201ENSMUST00000219782 344 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Gm24707-201ENSMUST00000082812 107 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Snord22-201ENSMUST00000083153 126 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Trim40Q3UWA4 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm12515-201ENSMUST00000120116 361 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Mir1947-201ENSMUST00000158235 85 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm25436-201ENSMUST00000158275 145 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm2855-201ENSMUST00000166765 456 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm10067-201ENSMUST00000179462 348 ntBASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim40Q3UWA4 Gm38333-201ENSMUST00000193608 604 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 181.7 ms