Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.58□□□□□ -2
Spg11Q3UHA3 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.58□□□□□ -2
Spg11Q3UHA3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.58□□□□□ -2
Spg11Q3UHA3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Mir542-201ENSMUST00000102186 85 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm14506-201ENSMUST00000121165 536 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm42824-201ENSMUST00000199361 247 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm43975-201ENSMUST00000203023 481 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm18026-201ENSMUST00000222789 727 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Spg11Q3UHA3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Spg11Q3UHA3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Spg11Q3UHA3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm24541-201ENSMUST00000103871 96 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm22469-201ENSMUST00000104118 133 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm16327-201ENSMUST00000137146 228 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm15275-201ENSMUST00000154752 347 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm26238-201ENSMUST00000175538 117 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm27160-201ENSMUST00000184837 199 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm21006-201ENSMUST00000196930 667 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm45395-201ENSMUST00000209891 559 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Gm18644-201ENSMUST00000211458 815 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.57□□□□□ -2
Spg11Q3UHA3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Spg11Q3UHA3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm11352-201ENSMUST00000119264 517 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm22961-201ENSMUST00000157964 106 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm43276-201ENSMUST00000199712 364 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Spg11Q3UHA3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm13771-201ENSMUST00000117988 238 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm14586-201ENSMUST00000119571 408 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm16260-201ENSMUST00000155141 304 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm22556-201ENSMUST00000157803 100 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm44370-201ENSMUST00000175436 112 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm44849-201ENSMUST00000207595 484 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 AC171206.1-201ENSMUST00000213612 213 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm24950-201ENSMUST00000082768 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm23971-201ENSMUST00000083317 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm23849-201ENSMUST00000083833 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Gm26316-201ENSMUST00000083886 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.56□□□□□ -2
Spg11Q3UHA3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.55□□□□□ -2
Spg11Q3UHA3 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Spg11Q3UHA3 Mir5127-201ENSMUST00000175295 71 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm5917-201ENSMUST00000217638 721 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm22155-201ENSMUST00000083836 162 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Spg11Q3UHA3 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.55□□□□□ -2
Spg11Q3UHA3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Spg11Q3UHA3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm4596-201ENSMUST00000117197 442 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm11221-201ENSMUST00000117230 597 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm14793-201ENSMUST00000118739 311 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm22257-201ENSMUST00000158687 301 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm24675-201ENSMUST00000158757 259 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.54□□□□□ -2
Spg11Q3UHA3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC2.54□□□□□ -2
Spg11Q3UHA3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.54□□□□□ -2
Spg11Q3UHA3 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms