Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm6510-201ENSMUST00000195916 574 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm45080-201ENSMUST00000206648 283 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm45814-201ENSMUST00000212646 775 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm19987-201ENSMUST00000216339 499 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm25131-201ENSMUST00000082653 151 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm22739-201ENSMUST00000083437 160 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trafd1Q3UDK1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm24376-201ENSMUST00000104399 127 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm14534-201ENSMUST00000120045 357 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm14903-201ENSMUST00000122435 537 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm17061-201ENSMUST00000163167 499 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm3123-201ENSMUST00000163480 480 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm26141-201ENSMUST00000175299 126 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Mir5098-201ENSMUST00000175320 82 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm23860-201ENSMUST00000179446 132 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm20574-201ENSMUST00000182867 917 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm27580-201ENSMUST00000183666 149 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm28785-201ENSMUST00000187478 379 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm29640-201ENSMUST00000187972 278 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm43227-201ENSMUST00000202239 677 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm44404-201ENSMUST00000203979 636 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm44830-201ENSMUST00000207667 584 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm46234-201ENSMUST00000218702 259 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.35□□□□□ -1.87
Trafd1Q3UDK1 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm22497-201ENSMUST00000104499 131 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm14811-201ENSMUST00000117070 117 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm13076-201ENSMUST00000118041 204 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm11881-201ENSMUST00000119408 572 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm24730-201ENSMUST00000158228 117 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm26365-201ENSMUST00000179177 94 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Mir7578-201ENSMUST00000183455 82 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm27942-201ENSMUST00000184669 101 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm18403-201ENSMUST00000192907 529 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm5552-201ENSMUST00000197149 515 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm43494-201ENSMUST00000197672 388 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm46103-201ENSMUST00000217614 341 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm19599-201ENSMUST00000218898 358 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm21007-201ENSMUST00000221024 326 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm10237-201ENSMUST00000078393 273 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm23455-201ENSMUST00000083331 100 ntBASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trafd1Q3UDK1 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.34□□□□□ -1.88
Trafd1Q3UDK1 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trafd1Q3UDK1 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.34□□□□□ -1.88
Trafd1Q3UDK1 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms