Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.73□□□□□ -1.81
Brf2Q3UAW9 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Snord22-201ENSMUST00000083153 126 ntBASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Brf2Q3UAW9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm12486-201ENSMUST00000120887 541 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm7308-201ENSMUST00000121087 447 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm11931-201ENSMUST00000121630 447 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm26177-201ENSMUST00000178683 107 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm8649-201ENSMUST00000181799 233 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm28304-201ENSMUST00000185977 312 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm28594-201ENSMUST00000187022 661 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm29256-201ENSMUST00000189094 312 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm28484-201ENSMUST00000190606 312 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm9722-201ENSMUST00000194568 802 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm18540-201ENSMUST00000204025 526 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm18944-201ENSMUST00000207672 643 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Brf2Q3UAW9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.71□□□□□ -1.81
Brf2Q3UAW9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Brf2Q3UAW9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm15180-201ENSMUST00000117745 492 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm15113-201ENSMUST00000119280 836 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm4916-201ENSMUST00000126139 642 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm26348-201ENSMUST00000157528 240 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm26173-201ENSMUST00000158416 136 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm25019-201ENSMUST00000179732 110 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm21960-201ENSMUST00000181924 452 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm29740-201ENSMUST00000193182 655 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm38332-201ENSMUST00000194189 147 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm37732-201ENSMUST00000194377 316 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm42465-201ENSMUST00000197036 492 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm19243-201ENSMUST00000198592 269 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm18194-201ENSMUST00000210455 481 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Brf2Q3UAW9 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.71□□□□□ -1.82
Brf2Q3UAW9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.7□□□□□ -1.82
Brf2Q3UAW9 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Brf2Q3UAW9 Gm13268-201ENSMUST00000117485 433 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms