Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm23326-201ENSMUST00000157419 105 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm22383-201ENSMUST00000158188 327 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm17153-201ENSMUST00000171314 490 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm37001-201ENSMUST00000193377 190 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm43601-201ENSMUST00000196294 945 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm42666-201ENSMUST00000201954 152 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm44543-201ENSMUST00000209136 396 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm3086-202ENSMUST00000221248 310 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Mir202-201ENSMUST00000083568 72 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm45176-201ENSMUST00000207696 4096 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm13386-201ENSMUST00000117677 124 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm13076-201ENSMUST00000118041 204 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm13478-201ENSMUST00000118312 413 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm15613-201ENSMUST00000118396 326 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm14358-201ENSMUST00000118458 403 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm14731-201ENSMUST00000119216 376 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm12891-201ENSMUST00000119358 240 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm16017-201ENSMUST00000119834 208 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm13751-201ENSMUST00000120280 752 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm25290-201ENSMUST00000122796 144 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm2862-201ENSMUST00000161524 328 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm5258-201ENSMUST00000165437 327 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm6486-201ENSMUST00000166202 434 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm19203-201ENSMUST00000174049 939 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm4479-201ENSMUST00000178807 171 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm26746-201ENSMUST00000181722 487 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm27317-201ENSMUST00000183533 95 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm17966-201ENSMUST00000193453 594 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm44523-201ENSMUST00000205616 417 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm45420-201ENSMUST00000211243 425 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm18225-201ENSMUST00000216708 742 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm25586-201ENSMUST00000082499 112 ntBASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Ddb1Q3U1J4 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm13349-201ENSMUST00000118436 411 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm12691-201ENSMUST00000120186 456 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm11438-201ENSMUST00000121582 189 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm22076-201ENSMUST00000158601 84 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm24739-201ENSMUST00000158855 292 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm25447-201ENSMUST00000158997 128 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Mir6938-201ENSMUST00000184173 63 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm43841-201ENSMUST00000199491 586 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm22155-201ENSMUST00000083836 162 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.11□□□□□ -1.59
Ddb1Q3U1J4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms