Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm22448-201ENSMUST00000179254 107 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Mir6412-201ENSMUST00000184477 97 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm19641-201ENSMUST00000188432 417 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm29475-201ENSMUST00000190767 312 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm5285-201ENSMUST00000193089 666 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm43601-201ENSMUST00000196294 945 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm18462-201ENSMUST00000208112 417 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.25□□□□□ -1.73
Col8a1Q00780 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.25□□□□□ -1.73
Col8a1Q00780 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm8288-201ENSMUST00000223406 593 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm2645-201ENSMUST00000223516 547 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm23623-201ENSMUST00000082461 107 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm23928-201ENSMUST00000082469 145 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col8a1Q00780 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm24889-201ENSMUST00000104388 132 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Mir466h-201ENSMUST00000104748 81 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm12112-201ENSMUST00000117772 231 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm15215-201ENSMUST00000117773 489 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm12806-201ENSMUST00000119384 268 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm15022-201ENSMUST00000122074 746 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm23905-201ENSMUST00000157568 109 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm9294-201ENSMUST00000165198 789 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Mir3066-201ENSMUST00000175296 83 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm24949-201ENSMUST00000183609 215 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm3010-201ENSMUST00000198805 448 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm43968-201ENSMUST00000203388 389 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.24□□□□□ -1.73
Col8a1Q00780 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm25126-201ENSMUST00000083343 102 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.24□□□□□ -1.73
Col8a1Q00780 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col8a1Q00780 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm13355-201ENSMUST00000117996 317 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm16358-201ENSMUST00000146046 210 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm24961-201ENSMUST00000157918 184 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm10087-201ENSMUST00000167650 330 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col8a1Q00780 Mir7658-201ENSMUST00000184043 57 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm28654-201ENSMUST00000189801 379 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm43717-201ENSMUST00000198684 310 ntBASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.23□□□□□ -1.73
Col8a1Q00780 Gm8132-201ENSMUST00000204938 640 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms