Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.63□□□□□ -1.67
Shmt1P50431 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm25088-201ENSMUST00000101803 79 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm14731-201ENSMUST00000119216 376 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm14815-201ENSMUST00000120060 488 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm14919-201ENSMUST00000120839 390 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm25784-201ENSMUST00000122524 81 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm22613-201ENSMUST00000122679 292 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm23902-201ENSMUST00000157571 134 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm22534-201ENSMUST00000158173 104 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm26362-201ENSMUST00000158865 315 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.63□□□□□ -1.67
Shmt1P50431 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm24306-201ENSMUST00000180229 79 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm27660-201ENSMUST00000184028 208 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm29556-201ENSMUST00000187591 696 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm37050-201ENSMUST00000193464 466 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm43559-201ENSMUST00000198755 466 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm43710-201ENSMUST00000199583 452 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm45171-201ENSMUST00000206360 736 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm45434-201ENSMUST00000210550 293 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm8423-201ENSMUST00000211387 607 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Gm8942-201ENSMUST00000217892 400 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Shmt1P50431 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.63□□□□□ -1.67
Shmt1P50431 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Shmt1P50431 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Mir105-201ENSMUST00000104655 80 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm23178-201ENSMUST00000116782 95 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Mir467g-201ENSMUST00000116906 120 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm14987-201ENSMUST00000117820 676 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm13804-201ENSMUST00000119552 172 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm5379-201ENSMUST00000120973 826 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm13409-201ENSMUST00000122072 546 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm10444-201ENSMUST00000126708 148 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm23332-201ENSMUST00000157424 275 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm25335-201ENSMUST00000158043 103 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm24737-201ENSMUST00000158861 100 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm16290-201ENSMUST00000161175 474 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm24810-201ENSMUST00000175317 70 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm44650-201ENSMUST00000206929 194 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm6929-201ENSMUST00000210930 468 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm45588-201ENSMUST00000211213 630 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Gm2436-201ENSMUST00000219562 774 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.62□□□□□ -1.67
Shmt1P50431 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm7117-201ENSMUST00000071515 387 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Shmt1P50431 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Shmt1P50431 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Shmt1P50431 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Shmt1P50431 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Shmt1P50431 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.62□□□□□ -1.67
Shmt1P50431 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms