Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28010-201ENSMUST00000179485 126 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Traf1P39428 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.2□□□□□ -1.74
Traf1P39428 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.2□□□□□ -1.74
Traf1P39428 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.2□□□□□ -1.74
Traf1P39428 Gm38329-201ENSMUST00000193473 427 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.2□□□□□ -1.74
Traf1P39428 Gm43096-201ENSMUST00000196173 421 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm19253-201ENSMUST00000204279 307 ntBASIC4.2□□□□□ -1.74
Traf1P39428 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.2□□□□□ -1.74
Traf1P39428 Gm18194-201ENSMUST00000210455 481 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm45420-201ENSMUST00000211243 425 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm45327-201ENSMUST00000211612 565 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm46194-201ENSMUST00000218136 320 ntBASIC4.2□□□□□ -1.74
Traf1P39428 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Traf1P39428 Snora70-201ENSMUST00000083047 137 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Traf1P39428 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Traf1P39428 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.2□□□□□ -1.74
Traf1P39428 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Traf1P39428 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Mir706-201ENSMUST00000102262 84 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm24987-201ENSMUST00000104453 134 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm11896-201ENSMUST00000121105 820 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm25369-201ENSMUST00000158848 132 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm17061-201ENSMUST00000163167 499 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Traf1P39428 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm4207-201ENSMUST00000173144 960 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm20399-201ENSMUST00000174652 132 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29299-201ENSMUST00000185609 923 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm8600-201ENSMUST00000186320 905 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29573-201ENSMUST00000190291 919 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm38281-201ENSMUST00000192301 315 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm2189-201ENSMUST00000201419 429 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm43415-201ENSMUST00000201934 750 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.19□□□□□ -1.74
Traf1P39428 Gm18672-201ENSMUST00000208035 270 ntBASIC4.19□□□□□ -1.74
Traf1P39428 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Traf1P39428 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.19□□□□□ -1.74
Traf1P39428 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.19□□□□□ -1.74
Traf1P39428 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.19□□□□□ -1.74
Traf1P39428 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms