Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nedd8P29595 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Gm15480-201ENSMUST00000120442 519 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm26355-201ENSMUST00000158220 105 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Gm22766-201ENSMUST00000158372 99 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm42593-201ENSMUST00000198469 377 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm20946-201ENSMUST00000212367 461 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 AC158523.2-201ENSMUST00000222708 548 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.42□□□□□ -2.02
Nedd8P29595 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Nedd8P29595 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Nedd8P29595 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm11576-201ENSMUST00000117433 417 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm7123-201ENSMUST00000117647 213 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm11229-201ENSMUST00000121993 437 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC2.41□□□□□ -2.02
Nedd8P29595 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Nedd8P29595 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.41□□□□□ -2.02
Nedd8P29595 Gm22646-201ENSMUST00000175130 115 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm20718-201ENSMUST00000176058 259 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.41□□□□□ -2.02
Nedd8P29595 Gm5473-201ENSMUST00000179326 642 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm29104-201ENSMUST00000186304 222 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.41□□□□□ -2.02
Nedd8P29595 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC2.41□□□□□ -2.02
Nedd8P29595 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.41□□□□□ -2.02
Nedd8P29595 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm36943-201ENSMUST00000194422 282 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm43722-201ENSMUST00000196054 124 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm18327-201ENSMUST00000202426 830 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.41□□□□□ -2.02
Nedd8P29595 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm9472-201ENSMUST00000221625 526 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Nedd8P29595 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Olfr480-201ENSMUST00000071658 1029 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Nedd8P29595 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Nedd8P29595 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
Nedd8P29595 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.41□□□□□ -2.02
Nedd8P29595 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Nedd8P29595 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Nedd8P29595 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.4□□□□□ -2.02
Nedd8P29595 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Nedd8P29595 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm13329-201ENSMUST00000117063 265 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Nedd8P29595 Gm22345-201ENSMUST00000122644 107 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm24730-201ENSMUST00000158228 117 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm15974-201ENSMUST00000159103 531 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm16563-201ENSMUST00000162673 423 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm3104-201ENSMUST00000171004 473 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.4□□□□□ -2.03
Nedd8P29595 Mir8118-201ENSMUST00000183962 129 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm29525-201ENSMUST00000189844 699 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm37495-201ENSMUST00000194590 264 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm36247-201ENSMUST00000211834 285 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC2.4□□□□□ -2.03
Nedd8P29595 Gm29884-201ENSMUST00000218403 453 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.4□□□□□ -2.03
Nedd8P29595 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Nedd8P29595 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Nedd8P29595 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Nedd8P29595 Mir878-201ENSMUST00000104680 78 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm26473-201ENSMUST00000116763 127 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm15282-201ENSMUST00000117707 300 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm11483-201ENSMUST00000119839 247 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm13913-201ENSMUST00000121126 260 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm7209-201ENSMUST00000122339 333 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm26411-201ENSMUST00000157668 107 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.39□□□□□ -2.03
Nedd8P29595 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm21756-201ENSMUST00000178380 930 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm21405-201ENSMUST00000179024 930 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm21241-201ENSMUST00000179551 934 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.39□□□□□ -2.03
Nedd8P29595 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms