Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm17966-201ENSMUST00000193453 594 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm37428-201ENSMUST00000193886 137 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm42438-201ENSMUST00000197832 974 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm43239-201ENSMUST00000200131 201 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm43897-201ENSMUST00000204019 309 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm19219-201ENSMUST00000215863 724 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm7540-201ENSMUST00000219764 926 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm5265-201ENSMUST00000076828 342 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm25764-201ENSMUST00000104092 134 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm25317-201ENSMUST00000116824 129 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm5762-201ENSMUST00000119204 258 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm11830-201ENSMUST00000120175 561 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm14939-201ENSMUST00000120347 680 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm22478-201ENSMUST00000122570 154 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm28146-201ENSMUST00000185517 701 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm19637-201ENSMUST00000185933 579 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm5829-201ENSMUST00000191383 351 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm42832-201ENSMUST00000196361 745 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm34091-201ENSMUST00000200875 604 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Gm35857-201ENSMUST00000212739 178 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr936-202ENSMUST00000216912 937 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Snora7a-201ENSMUST00000082629 140 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Mir350-201ENSMUST00000083639 99 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Cd40lgP27548 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Cd40lgP27548 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.2□□□□□ -1.9
Cd40lgP27548 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cd40lgP27548 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm11898-201ENSMUST00000117161 385 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm14142-201ENSMUST00000117833 296 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm14687-201ENSMUST00000120206 363 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm13574-201ENSMUST00000120482 394 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm25667-201ENSMUST00000157701 275 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm27592-201ENSMUST00000157729 126 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm23592-201ENSMUST00000157859 117 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm17117-201ENSMUST00000163665 299 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm17204-201ENSMUST00000167936 478 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm22174-201ENSMUST00000175050 125 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm22692-201ENSMUST00000175055 125 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm27634-201ENSMUST00000175060 126 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm22460-201ENSMUST00000175269 124 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm25535-201ENSMUST00000175364 125 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm24365-201ENSMUST00000175384 125 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm44310-201ENSMUST00000175424 126 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm22639-201ENSMUST00000175591 125 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm24754-201ENSMUST00000177997 107 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm24979-201ENSMUST00000178626 126 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm27743-201ENSMUST00000185136 126 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm43214-201ENSMUST00000199242 352 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm7443-201ENSMUST00000206355 378 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cd40lgP27548 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.19□□□□□ -1.9
Cd40lgP27548 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.19□□□□□ -1.9
Cd40lgP27548 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cd40lgP27548 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cd40lgP27548 Gm24147-201ENSMUST00000082763 144 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms