Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Msx1P13297 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm24886-201ENSMUST00000104384 123 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm13541-201ENSMUST00000119519 283 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm12808-201ENSMUST00000120597 404 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm22959-201ENSMUST00000122514 303 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm22984-201ENSMUST00000122751 122 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm5958-201ENSMUST00000147698 297 ntBASIC5.44□□□□□ -1.54
Msx1P13297 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm24441-201ENSMUST00000157235 281 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm25914-201ENSMUST00000157618 153 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm3053-201ENSMUST00000161709 616 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm5139-201ENSMUST00000175943 249 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm24264-201ENSMUST00000179835 94 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm2950-201ENSMUST00000185530 520 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm43583-201ENSMUST00000199235 303 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm43554-201ENSMUST00000199987 186 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm44219-201ENSMUST00000203005 273 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm7825-201ENSMUST00000204046 416 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm6049-201ENSMUST00000222369 458 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Msx1P13297 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Msx1P13297 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm23041-201ENSMUST00000083868 106 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Msx1P13297 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Msx1P13297 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Msx1P13297 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Msx1P13297 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 Mir592-201ENSMUST00000102113 96 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Gm14714-201ENSMUST00000119743 439 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Msx1P13297 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.43□□□□□ -1.54
Msx1P13297 Gm26106-201ENSMUST00000157254 228 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Gm25473-201ENSMUST00000180191 107 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Gm45315-201ENSMUST00000209283 333 ntBASIC5.43□□□□□ -1.54
Msx1P13297 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 Gm18188-201ENSMUST00000219386 478 ntBASIC5.43□□□□□ -1.54
Msx1P13297 AC164561.1-201ENSMUST00000220414 115 ntBASIC5.43□□□□□ -1.54
Msx1P13297 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Msx1P13297 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Msx1P13297 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Msx1P13297 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.43□□□□□ -1.54
Msx1P13297 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Msx1P13297 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.42□□□□□ -1.54
Msx1P13297 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm12704-201ENSMUST00000119789 464 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm14694-201ENSMUST00000121856 282 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm23887-201ENSMUST00000122683 172 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm4916-201ENSMUST00000126139 642 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm5558-201ENSMUST00000178933 495 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm25019-201ENSMUST00000179732 110 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm26701-201ENSMUST00000181571 234 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm27679-201ENSMUST00000184612 84 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm18444-201ENSMUST00000191239 629 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm18427-201ENSMUST00000195422 515 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms