Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm24640-201ENSMUST00000116949 126 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm22626-201ENSMUST00000116990 126 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm15994-201ENSMUST00000118029 402 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm8595-201ENSMUST00000118250 630 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm14871-201ENSMUST00000119056 194 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm12512-201ENSMUST00000119620 217 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm12808-201ENSMUST00000120597 404 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm15212-201ENSMUST00000122403 466 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm22106-201ENSMUST00000122544 127 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm24289-201ENSMUST00000157629 135 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Snora15-201ENSMUST00000177461 131 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm24761-201ENSMUST00000179589 127 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm24488-201ENSMUST00000179934 127 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm25701-201ENSMUST00000179988 127 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm26431-201ENSMUST00000180199 127 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm27976-201ENSMUST00000183635 162 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm4557-201ENSMUST00000185826 907 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm4526-201ENSMUST00000186039 920 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm8708-201ENSMUST00000188500 906 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm29524-201ENSMUST00000190819 699 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm37272-201ENSMUST00000193401 488 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm43710-201ENSMUST00000199583 452 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm17989-201ENSMUST00000211543 412 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm7676-201ENSMUST00000084055 319 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd4P10628 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.31□□□□□ -1.72
Hoxd4P10628 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd4P10628 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd4P10628 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm12564-201ENSMUST00000119860 321 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm12422-201ENSMUST00000121431 302 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm12685-201ENSMUST00000121702 214 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm12087-201ENSMUST00000121878 258 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm25362-201ENSMUST00000158854 105 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm26318-201ENSMUST00000176507 96 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm28283-201ENSMUST00000185509 178 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm28781-201ENSMUST00000185760 696 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm29307-201ENSMUST00000187367 696 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm29339-201ENSMUST00000189613 696 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm29407-201ENSMUST00000191468 696 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm43804-201ENSMUST00000198280 456 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm18904-201ENSMUST00000218756 329 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.3□□□□□ -1.72
Hoxd4P10628 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm6049-201ENSMUST00000222369 458 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd4P10628 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.3□□□□□ -1.72
Hoxd4P10628 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd4P10628 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms