Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mir7008-201ENSMUST00000184398 63 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm28883-201ENSMUST00000189256 369 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm37878-201ENSMUST00000192108 387 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm44844-201ENSMUST00000207242 336 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.5□□□□□ -1.69
Hoxd3P09027 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm25078-201ENSMUST00000082530 107 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Snord82-201ENSMUST00000082889 70 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Hoxd3P09027 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.5□□□□□ -1.69
Hoxd3P09027 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd3P09027 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm37686-201ENSMUST00000194099 2309 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm9239-201ENSMUST00000186942 2557 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Mir687-201ENSMUST00000102166 89 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm12704-201ENSMUST00000119789 464 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm12482-201ENSMUST00000120435 630 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm23887-201ENSMUST00000122683 172 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm4916-201ENSMUST00000126139 642 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm24441-201ENSMUST00000157235 281 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm26372-201ENSMUST00000157831 236 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm26489-201ENSMUST00000157880 264 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm25015-201ENSMUST00000158400 128 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Mir3095-201ENSMUST00000175552 87 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm43945-201ENSMUST00000203595 754 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm43991-201ENSMUST00000203751 274 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm7825-201ENSMUST00000204046 416 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm26456-201ENSMUST00000082831 111 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm22685-201ENSMUST00000082848 106 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm23095-201ENSMUST00000083446 107 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm10813-201ENSMUST00000099936 90 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Hoxd3P09027 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.49□□□□□ -1.69
Hoxd3P09027 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd3P09027 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC120375.1-201ENSMUST00000227034 3612 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 Mir592-201ENSMUST00000102113 96 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm24671-201ENSMUST00000104159 158 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm12568-201ENSMUST00000117362 624 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm14520-201ENSMUST00000119258 387 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm14119-201ENSMUST00000119511 235 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm25152-201ENSMUST00000157117 114 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm22766-201ENSMUST00000158372 99 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm16303-201ENSMUST00000161498 390 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms