Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm44726-201ENSMUST00000203427 217 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm43899-201ENSMUST00000203675 246 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.09□□□□□ -1.75
Col3a1P08121 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Col3a1P08121 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.09□□□□□ -1.75
Col3a1P08121 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col3a1P08121 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Col3a1P08121 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.09□□□□□ -1.76
Col3a1P08121 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.09□□□□□ -1.76
Col3a1P08121 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.09□□□□□ -1.76
Col3a1P08121 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col3a1P08121 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col3a1P08121 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col3a1P08121 Gm12156-201ENSMUST00000119188 554 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm13440-201ENSMUST00000121665 496 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm15986-201ENSMUST00000122153 400 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm23791-201ENSMUST00000122553 293 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm15508-201ENSMUST00000160330 325 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Gm8224-201ENSMUST00000166178 497 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col3a1P08121 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col3a1P08121 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col3a1P08121 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col3a1P08121 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.08□□□□□ -1.76
Col3a1P08121 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col3a1P08121 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col3a1P08121 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm24119-201ENSMUST00000103979 246 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm15110-201ENSMUST00000117545 881 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm14007-201ENSMUST00000118288 210 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm13751-201ENSMUST00000120280 752 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm22988-201ENSMUST00000122759 144 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm25839-201ENSMUST00000158921 103 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm22392-201ENSMUST00000177971 107 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm24465-201ENSMUST00000178398 107 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Mir6413-201ENSMUST00000184049 108 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm42824-201ENSMUST00000199361 247 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.07□□□□□ -1.76
Col3a1P08121 Gm42758-201ENSMUST00000202146 283 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm45658-201ENSMUST00000209197 580 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm8106-201ENSMUST00000213123 523 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm19709-201ENSMUST00000215403 482 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr192-201ENSMUST00000080251 925 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col3a1P08121 Snora31-201ENSMUST00000083213 130 ntBASIC4.07□□□□□ -1.76
Col3a1P08121 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col3a1P08121 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col3a1P08121 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Col3a1P08121 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col3a1P08121 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col3a1P08121 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm6797-201ENSMUST00000119440 512 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm8430-201ENSMUST00000119780 471 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm13443-201ENSMUST00000120770 555 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm6762-201ENSMUST00000121769 289 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm2892-201ENSMUST00000145537 711 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm20672-201ENSMUST00000176605 261 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.06□□□□□ -1.76
Col3a1P08121 Gm26652-202ENSMUST00000181672 475 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm27659-201ENSMUST00000183472 98 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm29263-201ENSMUST00000188718 463 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Gm43227-201ENSMUST00000202239 677 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Col3a1P08121 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.06□□□□□ -1.76
Col3a1P08121 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col3a1P08121 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms