Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.35□□□□□ -1.87
TnfP06804 Gm7946-201ENSMUST00000203326 958 ntBASIC3.35□□□□□ -1.87
TnfP06804 Gm19126-201ENSMUST00000207896 509 ntBASIC3.35□□□□□ -1.87
TnfP06804 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.35□□□□□ -1.87
TnfP06804 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.35□□□□□ -1.87
TnfP06804 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.35□□□□□ -1.87
TnfP06804 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.35□□□□□ -1.87
TnfP06804 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
TnfP06804 Gm26121-201ENSMUST00000083364 162 ntBASIC3.35□□□□□ -1.87
TnfP06804 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TnfP06804 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TnfP06804 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.34□□□□□ -1.87
TnfP06804 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TnfP06804 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TnfP06804 Gm12149-201ENSMUST00000117511 654 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm12118-201ENSMUST00000119766 532 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.34□□□□□ -1.87
TnfP06804 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TnfP06804 Gm17030-201ENSMUST00000167016 393 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TnfP06804 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TnfP06804 Gm28002-201ENSMUST00000184832 100 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm29602-201ENSMUST00000186887 442 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm43746-201ENSMUST00000200028 317 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.34□□□□□ -1.87
TnfP06804 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.34□□□□□ -1.87
TnfP06804 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.34□□□□□ -1.87
TnfP06804 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TnfP06804 Mir325-201ENSMUST00000083491 98 ntBASIC3.34□□□□□ -1.87
TnfP06804 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TnfP06804 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TnfP06804 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TnfP06804 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TnfP06804 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TnfP06804 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TnfP06804 Gm22187-201ENSMUST00000157819 129 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm26487-201ENSMUST00000158022 94 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm24666-201ENSMUST00000158937 167 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm5929-201ENSMUST00000166883 487 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm20542-201ENSMUST00000174582 372 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm18520-201ENSMUST00000174783 658 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm26061-201ENSMUST00000175584 108 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.33□□□□□ -1.88
TnfP06804 Gm4479-201ENSMUST00000178807 171 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm26297-201ENSMUST00000179464 132 ntBASIC3.33□□□□□ -1.88
TnfP06804 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm27233-201ENSMUST00000184030 307 ntBASIC3.33□□□□□ -1.88
TnfP06804 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm18505-201ENSMUST00000187360 790 ntBASIC3.33□□□□□ -1.88
TnfP06804 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TnfP06804 Gm43214-201ENSMUST00000199242 352 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm6064-201ENSMUST00000203999 454 ntBASIC3.33□□□□□ -1.88
TnfP06804 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TnfP06804 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TnfP06804 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TnfP06804 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TnfP06804 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TnfP06804 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TnfP06804 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TnfP06804 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TnfP06804 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.33□□□□□ -1.88
TnfP06804 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.32□□□□□ -1.88
TnfP06804 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm22939-201ENSMUST00000103958 131 ntBASIC3.32□□□□□ -1.88
TnfP06804 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.32□□□□□ -1.88
TnfP06804 Gm13504-201ENSMUST00000117490 316 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm16383-201ENSMUST00000118122 232 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm12587-201ENSMUST00000120180 427 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm26477-201ENSMUST00000122617 323 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm23205-201ENSMUST00000158671 103 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.32□□□□□ -1.88
TnfP06804 Mir8096-201ENSMUST00000184526 127 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm27308-201ENSMUST00000184807 233 ntBASIC3.32□□□□□ -1.88
TnfP06804 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.32□□□□□ -1.88
TnfP06804 Gm43601-201ENSMUST00000196294 945 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm6112-201ENSMUST00000208037 629 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm20039-201ENSMUST00000210329 394 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm30674-201ENSMUST00000214523 392 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm18225-201ENSMUST00000216708 742 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm8249-201ENSMUST00000219225 465 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm8274-201ENSMUST00000219820 463 ntBASIC3.32□□□□□ -1.88
TnfP06804 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.32□□□□□ -1.88
TnfP06804 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.32□□□□□ -1.88
TnfP06804 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TnfP06804 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TnfP06804 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
TnfP06804 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.32□□□□□ -1.88
TnfP06804 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.32□□□□□ -1.88
TnfP06804 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TnfP06804 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.31□□□□□ -1.88
TnfP06804 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms