Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm18505-201ENSMUST00000187360 790 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.54□□□□□ -1.84
ClppO88696 Gm33571-201ENSMUST00000193271 657 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm37617-201ENSMUST00000194309 159 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm7299-201ENSMUST00000194441 581 ntBASIC3.54□□□□□ -1.84
ClppO88696 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm18327-201ENSMUST00000202426 830 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm18602-201ENSMUST00000209794 851 ntBASIC3.54□□□□□ -1.84
ClppO88696 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm45551-201ENSMUST00000211459 928 ntBASIC3.54□□□□□ -1.84
ClppO88696 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.54□□□□□ -1.84
ClppO88696 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.54□□□□□ -1.84
ClppO88696 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.54□□□□□ -1.84
ClppO88696 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.54□□□□□ -1.84
ClppO88696 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ClppO88696 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.54□□□□□ -1.84
ClppO88696 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.54□□□□□ -1.84
ClppO88696 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
ClppO88696 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Mir693-201ENSMUST00000102187 89 ntBASIC3.53□□□□□ -1.84
ClppO88696 Mir208b-201ENSMUST00000104735 77 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm11488-201ENSMUST00000117277 863 ntBASIC3.53□□□□□ -1.84
ClppO88696 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm13379-201ENSMUST00000118053 621 ntBASIC3.53□□□□□ -1.84
ClppO88696 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm12954-201ENSMUST00000118610 611 ntBASIC3.53□□□□□ -1.84
ClppO88696 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm11830-201ENSMUST00000120175 561 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm15387-201ENSMUST00000120421 648 ntBASIC3.53□□□□□ -1.84
ClppO88696 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.53□□□□□ -1.84
ClppO88696 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.53□□□□□ -1.84
ClppO88696 Gm22320-201ENSMUST00000157149 312 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm22380-201ENSMUST00000157479 95 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm22186-201ENSMUST00000157822 122 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Gm22776-201ENSMUST00000178634 94 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm23767-201ENSMUST00000179278 94 ntBASIC3.53□□□□□ -1.84
ClppO88696 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.53□□□□□ -1.84
ClppO88696 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.53□□□□□ -1.84
ClppO88696 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.53□□□□□ -1.84
ClppO88696 Gm5552-201ENSMUST00000197149 515 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm6112-201ENSMUST00000208037 629 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm45696-201ENSMUST00000212088 985 ntBASIC3.53□□□□□ -1.84
ClppO88696 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.53□□□□□ -1.84
ClppO88696 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.53□□□□□ -1.84
ClppO88696 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.53□□□□□ -1.84
ClppO88696 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ClppO88696 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Gm23925-201ENSMUST00000082471 132 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm24147-201ENSMUST00000082763 144 ntBASIC3.53□□□□□ -1.84
ClppO88696 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.53□□□□□ -1.84
ClppO88696 Gm5518-201ENSMUST00000084171 648 ntBASIC3.53□□□□□ -1.84
ClppO88696 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ClppO88696 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ClppO88696 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ClppO88696 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
ClppO88696 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.53□□□□□ -1.85
ClppO88696 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.52□□□□□ -1.85
ClppO88696 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ClppO88696 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm14677-201ENSMUST00000117866 486 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm13076-201ENSMUST00000118041 204 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm14687-201ENSMUST00000120206 363 ntBASIC3.52□□□□□ -1.85
ClppO88696 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ClppO88696 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.52□□□□□ -1.85
ClppO88696 Gm22310-201ENSMUST00000157509 116 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm26349-201ENSMUST00000157530 130 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm17061-201ENSMUST00000163167 499 ntBASIC3.52□□□□□ -1.85
ClppO88696 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.52□□□□□ -1.85
ClppO88696 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ClppO88696 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ClppO88696 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ClppO88696 Gm27942-201ENSMUST00000184669 101 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ClppO88696 Gm9632-201ENSMUST00000195934 643 ntBASIC3.52□□□□□ -1.85
ClppO88696 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ClppO88696 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.52□□□□□ -1.85
ClppO88696 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm43239-201ENSMUST00000200131 201 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.52□□□□□ -1.85
ClppO88696 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ClppO88696 Gm18645-201ENSMUST00000209593 651 ntBASIC3.52□□□□□ -1.85
ClppO88696 Gm45420-201ENSMUST00000211243 425 ntBASIC3.52□□□□□ -1.85
ClppO88696 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.52□□□□□ -1.85
ClppO88696 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.52□□□□□ -1.85
ClppO88696 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms