Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Mir759-201ENSMUST00000103254 98 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm11221-201ENSMUST00000117230 597 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm14880-201ENSMUST00000117581 292 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm12156-201ENSMUST00000119188 554 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm14559-201ENSMUST00000121745 496 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm24635-201ENSMUST00000122712 128 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm25430-201ENSMUST00000157614 289 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm20397-201ENSMUST00000174520 362 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm28016-201ENSMUST00000184594 196 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm29376-201ENSMUST00000189357 835 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm29454-201ENSMUST00000190805 393 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm37455-201ENSMUST00000191993 529 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm10048-201ENSMUST00000194196 372 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm32447-201ENSMUST00000194265 697 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm43554-201ENSMUST00000199987 186 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm43028-201ENSMUST00000202561 481 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm43968-201ENSMUST00000203388 389 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm6929-201ENSMUST00000210930 468 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm17990-201ENSMUST00000211728 553 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm8158-201ENSMUST00000219220 465 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm8249-201ENSMUST00000219225 465 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm2436-201ENSMUST00000219562 774 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm8112-201ENSMUST00000219637 465 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm9309-201ENSMUST00000223537 546 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Mir188-201ENSMUST00000083464 68 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Mir28a-201ENSMUST00000083560 86 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim55G3X8Y1 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.82□□□□□ -1.64
Trim55G3X8Y1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm24889-201ENSMUST00000104388 132 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm15752-201ENSMUST00000117427 394 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm11490-201ENSMUST00000118128 272 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm14714-201ENSMUST00000119743 439 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm16362-201ENSMUST00000135189 214 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm23537-201ENSMUST00000157536 330 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Scarna6-201ENSMUST00000158656 265 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm23774-201ENSMUST00000158990 131 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm24418-201ENSMUST00000177597 79 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm24639-201ENSMUST00000178518 79 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm23076-201ENSMUST00000179082 79 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm25077-201ENSMUST00000179157 79 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm24464-201ENSMUST00000179697 107 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm43976-201ENSMUST00000203637 235 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm44041-201ENSMUST00000203678 396 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm44687-201ENSMUST00000204975 235 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm10064-201ENSMUST00000071235 399 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm7099-201ENSMUST00000080066 554 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm23345-201ENSMUST00000083817 150 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm5670-201ENSMUST00000093546 372 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim55G3X8Y1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms