| Spata31d1a | E9QA35 | Gm12074-201 | ENSMUST00000120189 | 219 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm13557-201 | ENSMUST00000120771 | 382 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm11679-201 | ENSMUST00000121830 | 779 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | 4933406D12Rik-201 | ENSMUST00000147212 | 737 nt | TSL 1 (best) BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm14330-201 | ENSMUST00000155455 | 455 nt | TSL 5 BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm12869-201 | ENSMUST00000156265 | 344 nt | TSL 2 BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm22916-201 | ENSMUST00000157616 | 119 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Mir1963-201 | ENSMUST00000158594 | 59 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm24085-201 | ENSMUST00000175172 | 116 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Mir3112-201 | ENSMUST00000175431 | 82 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm22420-201 | ENSMUST00000178795 | 126 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28017-201 | ENSMUST00000183434 | 126 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28163-201 | ENSMUST00000187099 | 325 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | 4930519L02Rik-202 | ENSMUST00000200254 | 452 nt | TSL 3 BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm10445-201 | ENSMUST00000203521 | 762 nt | TSL 2 BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm19244-201 | ENSMUST00000204340 | 253 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm33601-201 | ENSMUST00000210001 | 961 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | AC166902.1-201 | ENSMUST00000216653 | 517 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | CT025579.3-201 | ENSMUST00000224543 | 451 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | AC100733.1-201 | ENSMUST00000228494 | 407 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm26128-201 | ENSMUST00000083170 | 110 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm23460-201 | ENSMUST00000083258 | 109 nt | BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Slc44a1-205 | ENSMUST00000107651 | 4382 nt | APPRIS ALT1 TSL 5 BASIC | 5.96 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | 3110043O21Rik-202 | ENSMUST00000108126 | 2644 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Slfn4-201 | ENSMUST00000000208 | 3958 nt | APPRIS P1 TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Nexn-201 | ENSMUST00000046045 | 2564 nt | APPRIS P2 TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Vmn1r34-202 | ENSMUST00000226262 | 2952 nt | APPRIS P1 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Ugt8a-203 | ENSMUST00000198610 | 3762 nt | APPRIS P1 TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Vmn1r6-202 | ENSMUST00000226689 | 8453 nt | APPRIS P2 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Zfand6-201 | ENSMUST00000069537 | 1658 nt | APPRIS P1 TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm10295-201 | ENSMUST00000094315 | 2525 nt | APPRIS P1 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Trav8d-2-201 | ENSMUST00000103605 | 334 nt | APPRIS ALT2 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | n-R5s202-201 | ENSMUST00000104517 | 114 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm12850-201 | ENSMUST00000119210 | 436 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm23219-201 | ENSMUST00000158123 | 87 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm24295-201 | ENSMUST00000158298 | 131 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Rpl30-ps2-201 | ENSMUST00000160070 | 291 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm22699-201 | ENSMUST00000175376 | 105 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm27148-201 | ENSMUST00000185086 | 160 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21842-202 | ENSMUST00000185311 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29285-201 | ENSMUST00000185500 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21801-202 | ENSMUST00000185537 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28312-201 | ENSMUST00000185976 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29213-201 | ENSMUST00000186199 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21428-201 | ENSMUST00000186550 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29370-201 | ENSMUST00000186581 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21633-202 | ENSMUST00000186630 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28890-201 | ENSMUST00000186686 | 173 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28092-201 | ENSMUST00000186709 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21572-202 | ENSMUST00000186850 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21916-202 | ENSMUST00000187044 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29839-201 | ENSMUST00000187045 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28442-201 | ENSMUST00000187052 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21780-202 | ENSMUST00000187110 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29656-201 | ENSMUST00000187236 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21821-202 | ENSMUST00000187288 | 175 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28886-201 | ENSMUST00000187350 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21599-202 | ENSMUST00000187381 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28128-201 | ENSMUST00000187403 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21450-201 | ENSMUST00000187408 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28689-201 | ENSMUST00000187441 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28851-201 | ENSMUST00000187800 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28554-201 | ENSMUST00000187964 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28984-201 | ENSMUST00000188202 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21529-202 | ENSMUST00000188473 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28604-202 | ENSMUST00000188638 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21588-202 | ENSMUST00000188721 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21539-202 | ENSMUST00000188764 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28216-201 | ENSMUST00000188785 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29645-201 | ENSMUST00000189117 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21413-201 | ENSMUST00000189224 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21723-202 | ENSMUST00000189444 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm36782-201 | ENSMUST00000189459 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21419-201 | ENSMUST00000189495 | 173 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28566-202 | ENSMUST00000189532 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21626-202 | ENSMUST00000189751 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28656-201 | ENSMUST00000190017 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21562-202 | ENSMUST00000190314 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28517-201 | ENSMUST00000190343 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29531-201 | ENSMUST00000190569 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21914-202 | ENSMUST00000190577 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm20978-201 | ENSMUST00000190688 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm20963-201 | ENSMUST00000190880 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29316-201 | ENSMUST00000190953 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29351-201 | ENSMUST00000191052 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm29466-201 | ENSMUST00000191077 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm20987-201 | ENSMUST00000191165 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28194-202 | ENSMUST00000191217 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm28461-202 | ENSMUST00000191406 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm37927-201 | ENSMUST00000192238 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm37544-201 | ENSMUST00000192803 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm37635-201 | ENSMUST00000193129 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm21809-202 | ENSMUST00000194072 | 174 nt | TSL 1 (best) BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Mir1a-2-201 | ENSMUST00000198520 | 72 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm42814-201 | ENSMUST00000199370 | 460 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm42500-201 | ENSMUST00000199898 | 517 nt | TSL 3 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm42761-201 | ENSMUST00000201899 | 738 nt | TSL 3 BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm35648-201 | ENSMUST00000202304 | 475 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | Gm45013-201 | ENSMUST00000206883 | 178 nt | BASIC | 5.95 | □□□□□ -1.46 | | |
| Spata31d1a | E9QA35 | AC159896.3-201 | ENSMUST00000215904 | 3835 nt | BASIC | 5.95 | □□□□□ -1.46 | | |