Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm16318-201ENSMUST00000162402 601 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm21959-201ENSMUST00000178439 452 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm27959-201ENSMUST00000185172 111 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 LOC667541-201ENSMUST00000223408 278 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm22622-201ENSMUST00000082870 129 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm22864-201ENSMUST00000083950 130 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm23060-201ENSMUST00000102345 109 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm11877-201ENSMUST00000118921 852 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm11414-201ENSMUST00000121795 263 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm24465-201ENSMUST00000178398 107 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm26993-201ENSMUST00000182766 789 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.22□□□□□ -2.05
Col6a4A2AX52 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.22□□□□□ -2.05
Col6a4A2AX52 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col6a4A2AX52 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col6a4A2AX52 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.21□□□□□ -2.05
Col6a4A2AX52 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm14655-201ENSMUST00000120124 578 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm24210-201ENSMUST00000158263 133 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm26983-201ENSMUST00000182051 388 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm38283-201ENSMUST00000193041 695 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col6a4A2AX52 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm7421-201ENSMUST00000119298 639 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm7365-201ENSMUST00000120877 639 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm25113-201ENSMUST00000157185 143 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm18486-201ENSMUST00000184040 298 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm38166-201ENSMUST00000191660 471 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Olfr844-201ENSMUST00000054106 930 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm14848-201ENSMUST00000121850 467 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm12956-201ENSMUST00000122184 414 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm22264-201ENSMUST00000178200 107 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm27315-201ENSMUST00000183977 154 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm29330-201ENSMUST00000190032 699 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm28098-201ENSMUST00000191361 699 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.2□□□□□ -2.06
Col6a4A2AX52 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Snora23-201ENSMUST00000082517 184 ntBASIC2.2□□□□□ -2.06
Col6a4A2AX52 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm14448-201ENSMUST00000116383 210 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm29556-201ENSMUST00000187591 696 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm9174-201ENSMUST00000078149 255 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Mir26a-1-201ENSMUST00000083579 90 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm43826-201ENSMUST00000199604 2612 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Mir466i-201ENSMUST00000116924 121 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm13349-201ENSMUST00000118436 411 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm16471-201ENSMUST00000121940 618 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm22534-201ENSMUST00000158173 104 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms