Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm13167-201ENSMUST00000118554 578 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm7219-201ENSMUST00000119619 297 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm11414-201ENSMUST00000121795 263 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm4725-201ENSMUST00000151048 587 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm22531-201ENSMUST00000158819 140 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm27903-201ENSMUST00000175482 126 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm4854-201ENSMUST00000185902 574 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm38201-201ENSMUST00000192143 387 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm37281-201ENSMUST00000192412 439 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm37001-201ENSMUST00000193377 190 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Trbv8-201ENSMUST00000194020 285 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm37576-201ENSMUST00000194228 372 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm43142-201ENSMUST00000198670 361 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm45146-201ENSMUST00000207108 221 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm18598-201ENSMUST00000207724 597 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm6929-201ENSMUST00000210930 468 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm35405-201ENSMUST00000218754 400 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm30738-201ENSMUST00000221346 502 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm25205-201ENSMUST00000082841 103 ntBASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm44742-201ENSMUST00000207190 1412 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm24120-201ENSMUST00000103978 129 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm11372-201ENSMUST00000117348 570 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm11393-201ENSMUST00000118019 288 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm13873-201ENSMUST00000119208 427 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm4852-201ENSMUST00000121202 729 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm25107-201ENSMUST00000122472 129 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm25999-201ENSMUST00000175398 133 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21241-201ENSMUST00000179551 934 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm27698-201ENSMUST00000184060 249 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm20819-201ENSMUST00000191091 925 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm20871-201ENSMUST00000191322 931 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm42832-201ENSMUST00000196361 745 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm42465-201ENSMUST00000197036 492 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm18660-201ENSMUST00000199542 629 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm42926-201ENSMUST00000200496 697 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm18410-201ENSMUST00000207199 577 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm44656-201ENSMUST00000208428 490 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm18268-201ENSMUST00000208445 943 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm5655-201ENSMUST00000221078 901 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Platr25-208ENSMUST00000222602 939 ntBASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav11A0A0B4J1J9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms