Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm36968-201ENSMUST00000193737 315 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm8790-201ENSMUST00000194108 322 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm7142-201ENSMUST00000194232 586 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm38290-201ENSMUST00000195238 315 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm44354-201ENSMUST00000196017 143 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm43245-201ENSMUST00000197603 468 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm43142-201ENSMUST00000198670 361 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm3010-201ENSMUST00000198805 448 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm42453-201ENSMUST00000200477 409 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm3189-201ENSMUST00000205595 832 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm9375-201ENSMUST00000208899 903 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm29817-201ENSMUST00000210098 172 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm9818-201ENSMUST00000050900 255 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H2afb1S4R1E0 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm6664-201ENSMUST00000119138 468 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm15452-201ENSMUST00000119877 240 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm15111-201ENSMUST00000122142 878 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm26401-201ENSMUST00000158502 76 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm24550-201ENSMUST00000158648 279 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm6900-201ENSMUST00000178971 342 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm27538-201ENSMUST00000185065 294 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm18448-201ENSMUST00000186286 599 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm43582-201ENSMUST00000196149 343 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm43155-201ENSMUST00000202661 494 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm45912-201ENSMUST00000210646 543 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm5175-202ENSMUST00000219699 529 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm18921-201ENSMUST00000221798 366 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Snord22-201ENSMUST00000083153 126 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
H2afb1S4R1E0 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm23691-201ENSMUST00000101878 107 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm22091-201ENSMUST00000116908 127 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm15659-201ENSMUST00000118881 341 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm11943-201ENSMUST00000119473 327 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm16445-201ENSMUST00000120399 714 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm5646-201ENSMUST00000120568 714 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm14506-201ENSMUST00000121165 536 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm4852-201ENSMUST00000121202 729 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm26476-201ENSMUST00000122618 313 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm22208-201ENSMUST00000122658 110 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm23032-201ENSMUST00000157995 107 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm17030-201ENSMUST00000167016 393 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm5527-201ENSMUST00000179821 642 ntBASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.38□□□□□ -1.87
H2afb1S4R1E0 Gm27428-201ENSMUST00000184289 110 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms