Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm8692-201ENSMUST00000118102 438 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm14521-201ENSMUST00000119545 350 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm25223-201ENSMUST00000158200 110 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm22766-201ENSMUST00000158372 99 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm17052-201ENSMUST00000165496 289 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm37358-201ENSMUST00000195492 479 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm43651-201ENSMUST00000199796 439 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm44871-201ENSMUST00000207821 497 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm9685-201ENSMUST00000211275 538 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm7802-201ENSMUST00000216464 262 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Snord82-201ENSMUST00000082889 70 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Mir27a-201ENSMUST00000083510 87 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm22828-201ENSMUST00000083768 107 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Robo2-210ENSMUST00000226478 8059 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC091683.1-201ENSMUST00000222307 2446 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Mir678-201ENSMUST00000102114 84 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm14119-201ENSMUST00000119511 235 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm12413-201ENSMUST00000121508 312 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm14770-201ENSMUST00000122197 312 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm16060-201ENSMUST00000153140 478 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm23743-201ENSMUST00000157389 274 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm24885-201ENSMUST00000158783 270 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Mir3080-201ENSMUST00000175010 79 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm27645-201ENSMUST00000183348 77 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm37681-201ENSMUST00000193880 727 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm5002-201ENSMUST00000207145 223 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm18405-201ENSMUST00000220743 511 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC113031.4-201ENSMUST00000228381 514 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm23330-201ENSMUST00000082660 164 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm26457-201ENSMUST00000082678 78 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm26454-201ENSMUST00000082682 107 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.41□□□□□ -1.54
Nubp1Q9R060 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.41□□□□□ -1.54
Nubp1Q9R060 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.4□□□□□ -1.54
Nubp1Q9R060 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nubp1Q9R060 Mir708-201ENSMUST00000102189 109 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms