Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Mir592-201ENSMUST00000102113 96 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm24318-201ENSMUST00000104490 131 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm15025-201ENSMUST00000118434 418 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm11982-201ENSMUST00000121480 314 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm11281-201ENSMUST00000141391 576 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm24910-201ENSMUST00000157289 272 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm23084-201ENSMUST00000157850 114 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm25436-201ENSMUST00000158275 145 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Mir7047-201ENSMUST00000184595 64 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm17929-201ENSMUST00000186851 627 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm43814-201ENSMUST00000197851 413 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm43198-201ENSMUST00000200927 326 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm8745-201ENSMUST00000207846 782 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 CT010505.1-201ENSMUST00000227026 396 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm23443-201ENSMUST00000082916 128 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm336-201ENSMUST00000186376 1480 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.28□□□□□ -1.72
Trim54Q9ERP3 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Mir883a-201ENSMUST00000104824 76 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm15113-201ENSMUST00000119280 836 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm12900-201ENSMUST00000120919 573 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm25052-201ENSMUST00000122661 158 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm22059-201ENSMUST00000157544 104 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm26320-201ENSMUST00000157742 306 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm25606-201ENSMUST00000158363 95 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm23312-201ENSMUST00000158774 102 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm37239-201ENSMUST00000193510 141 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm44128-201ENSMUST00000204909 219 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm6240-201ENSMUST00000208014 473 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm45439-201ENSMUST00000211723 359 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm18120-201ENSMUST00000220079 511 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm18026-201ENSMUST00000222789 727 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm24446-201ENSMUST00000083982 156 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim54Q9ERP3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms