Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26061-201ENSMUST00000175584 108 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm27374-201ENSMUST00000183660 81 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm44157-201ENSMUST00000204720 410 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm7624-201ENSMUST00000209702 435 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm45380-201ENSMUST00000210465 315 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm18871-201ENSMUST00000218655 745 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm15799-201ENSMUST00000120899 289 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm14577-201ENSMUST00000121134 256 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm15116-201ENSMUST00000122248 663 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm15147-201ENSMUST00000122263 483 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm23213-201ENSMUST00000122715 313 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm25292-201ENSMUST00000122797 322 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm25977-201ENSMUST00000158697 85 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm23028-201ENSMUST00000158773 265 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm26928-201ENSMUST00000182674 572 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm27477-201ENSMUST00000184649 143 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm28196-201ENSMUST00000187719 640 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm6112-201ENSMUST00000208037 629 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm19987-201ENSMUST00000216339 499 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 AC142499.1-201ENSMUST00000220036 374 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm19563-201ENSMUST00000222031 270 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 CT009604.2-201ENSMUST00000225531 377 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm25202-201ENSMUST00000082838 191 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Mir21a-201ENSMUST00000083521 92 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Gm26176-201ENSMUST00000083795 105 ntBASIC3□□□□□ -1.93
Lima1Q9ERG0 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3□□□□□ -1.93
Lima1Q9ERG0 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Lima1Q9ERG0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm12902-201ENSMUST00000118389 322 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm15988-201ENSMUST00000118677 367 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm14647-201ENSMUST00000119392 680 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm13273-201ENSMUST00000119737 159 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm14903-201ENSMUST00000122435 537 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm15946-201ENSMUST00000160654 423 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm16147-201ENSMUST00000162143 373 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm32381-201ENSMUST00000203192 476 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm44425-201ENSMUST00000203739 429 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm9375-201ENSMUST00000208899 903 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm18602-201ENSMUST00000209794 851 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm22829-201ENSMUST00000083771 106 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Gm25004-201ENSMUST00000083811 161 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Lima1Q9ERG0 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm22590-201ENSMUST00000104247 128 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm14591-201ENSMUST00000120407 518 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm11414-201ENSMUST00000121795 263 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm16563-201ENSMUST00000162673 423 ntBASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Lima1Q9ERG0 Gm20673-201ENSMUST00000177167 430 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms