Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm22718-201ENSMUST00000122701 315 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm9498-201ENSMUST00000140849 291 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm25314-201ENSMUST00000178810 79 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm26993-201ENSMUST00000182766 789 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm28255-201ENSMUST00000187101 694 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm4322-201ENSMUST00000191094 336 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm44320-201ENSMUST00000199276 86 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm18120-201ENSMUST00000220079 511 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm5955-201ENSMUST00000222712 219 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm7984-201ENSMUST00000060640 538 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.37□□□□□ -1.55
Upf1Q9EPU0 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm14594-201ENSMUST00000118052 537 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm14590-201ENSMUST00000118934 537 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm12837-201ENSMUST00000120131 373 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm25104-201ENSMUST00000122476 163 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm23078-201ENSMUST00000157848 148 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm24931-201ENSMUST00000158324 107 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm23312-201ENSMUST00000158774 102 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm23473-201ENSMUST00000158883 116 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm14596-201ENSMUST00000180268 537 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm14595-201ENSMUST00000180335 537 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm27233-201ENSMUST00000184030 307 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm37081-201ENSMUST00000192034 196 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm37889-201ENSMUST00000194174 251 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm9317-201ENSMUST00000197055 862 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm23515-201ENSMUST00000082829 107 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm25512-201ENSMUST00000083863 107 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Upf1Q9EPU0 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm12149-201ENSMUST00000117511 654 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm11859-201ENSMUST00000118099 455 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm23463-201ENSMUST00000122468 99 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm26255-201ENSMUST00000122492 103 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm3851-201ENSMUST00000168653 318 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm22290-201ENSMUST00000177655 107 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm22583-201ENSMUST00000178031 107 ntBASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf1Q9EPU0 Mir6345-201ENSMUST00000184286 128 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms