Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm23532-201ENSMUST00000104569 112 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Mir294-201ENSMUST00000104710 84 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm6374-201ENSMUST00000159051 788 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm9628-201ENSMUST00000222169 725 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm23297-201ENSMUST00000083184 127 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Mir325-201ENSMUST00000083491 98 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.13□□□□□ -1.91
Cdc40Q9DC48 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm24951-201ENSMUST00000102182 109 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm23175-201ENSMUST00000104371 132 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm26143-201ENSMUST00000104480 108 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm13167-201ENSMUST00000118554 578 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm11876-201ENSMUST00000120002 269 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm24592-201ENSMUST00000122505 106 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm16363-201ENSMUST00000132460 877 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm23773-201ENSMUST00000158985 296 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm7909-201ENSMUST00000182688 614 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm37828-201ENSMUST00000192496 432 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm37684-201ENSMUST00000192779 355 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm9379-201ENSMUST00000196790 646 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cdc40Q9DC48 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm22023-201ENSMUST00000104354 130 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm14607-201ENSMUST00000119119 491 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm6591-201ENSMUST00000121063 434 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm6762-201ENSMUST00000121769 289 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm24936-201ENSMUST00000122598 247 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm25295-201ENSMUST00000122794 306 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm26933-201ENSMUST00000182320 827 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm6501-201ENSMUST00000187178 916 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm29747-201ENSMUST00000194764 585 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm19030-201ENSMUST00000194947 552 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm42516-201ENSMUST00000198691 767 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm44266-201ENSMUST00000205235 500 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Gm18388-201ENSMUST00000222339 557 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cdc40Q9DC48 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms