Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22939-201ENSMUST00000103958 131 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24068-201ENSMUST00000104513 132 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm7071-201ENSMUST00000120458 462 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm13502-201ENSMUST00000121574 684 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23505-201ENSMUST00000158989 130 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm27893-201ENSMUST00000184408 194 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm19080-201ENSMUST00000196082 550 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm42665-201ENSMUST00000202100 586 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm43899-201ENSMUST00000203675 246 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm5322-201ENSMUST00000206142 699 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm4528-201ENSMUST00000207905 551 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr844-201ENSMUST00000054106 930 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.07□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23942-201ENSMUST00000101956 107 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24142-201ENSMUST00000101960 107 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24787-201ENSMUST00000157380 123 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22538-201ENSMUST00000158169 299 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm26215-201ENSMUST00000158584 139 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18520-201ENSMUST00000174783 658 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm23402-201ENSMUST00000178130 107 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Mir6916-201ENSMUST00000184514 63 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm37219-201ENSMUST00000192036 926 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm43295-201ENSMUST00000201439 412 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm31532-201ENSMUST00000203555 767 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm44092-201ENSMUST00000204470 258 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm18225-201ENSMUST00000216708 742 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm4928-201ENSMUST00000219622 850 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22154-201ENSMUST00000083844 131 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.06□□□□□ -1.92
Ccdc3Q9D6Y1 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm16331-201ENSMUST00000144274 498 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm22600-201ENSMUST00000157598 269 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm17030-201ENSMUST00000167016 393 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Mir6393-201ENSMUST00000183709 94 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm6501-201ENSMUST00000187178 916 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm44223-201ENSMUST00000204854 114 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm45400-201ENSMUST00000211603 653 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm5649-201ENSMUST00000217918 951 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm5175-202ENSMUST00000219699 529 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24817-201ENSMUST00000093672 105 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc3Q9D6Y1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc3Q9D6Y1 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms