Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm13064-201ENSMUST00000119125 557 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm26100-201ENSMUST00000157245 127 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm23587-201ENSMUST00000157658 84 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm24417-201ENSMUST00000178123 79 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm24653-201ENSMUST00000178541 79 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm25934-201ENSMUST00000178642 79 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Mir7578-201ENSMUST00000183455 82 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm28785-201ENSMUST00000187478 379 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm43704-201ENSMUST00000196164 496 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm44392-201ENSMUST00000196758 115 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm23846-201ENSMUST00000083835 107 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.95□□□□□ -1.78
Ccdc39Q9D5Y1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm24096-201ENSMUST00000103905 110 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm12515-201ENSMUST00000120116 361 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm14581-201ENSMUST00000121726 198 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm26988-201ENSMUST00000183296 945 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm18855-201ENSMUST00000206689 570 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc39Q9D5Y1 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm22709-201ENSMUST00000116893 111 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm11708-201ENSMUST00000119530 832 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm15142-201ENSMUST00000121013 856 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm38214-201ENSMUST00000192581 988 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm20162-201ENSMUST00000193629 871 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37002-201ENSMUST00000194560 373 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm37993-201ENSMUST00000195301 988 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm9379-201ENSMUST00000196790 646 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm19418-201ENSMUST00000197436 580 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc39Q9D5Y1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms