Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Vps28Q9D1C8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm25169-201ENSMUST00000104190 129 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm12427-201ENSMUST00000117719 302 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm14669-201ENSMUST00000118841 250 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm22561-201ENSMUST00000157331 84 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm25436-201ENSMUST00000158275 145 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm10357-201ENSMUST00000159886 264 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Mir5710-201ENSMUST00000176884 69 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm19224-201ENSMUST00000190477 793 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm44099-201ENSMUST00000203299 112 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm18944-201ENSMUST00000207672 643 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm45439-201ENSMUST00000211723 359 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Vps28Q9D1C8 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Vps28Q9D1C8 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Vps28Q9D1C8 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.96□□□□□ -1.77
Vps28Q9D1C8 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Vps28Q9D1C8 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Vps28Q9D1C8 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.96□□□□□ -1.77
Vps28Q9D1C8 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.96□□□□□ -1.77
Vps28Q9D1C8 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm26273-201ENSMUST00000104180 131 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm13737-201ENSMUST00000119793 232 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm15037-201ENSMUST00000120358 259 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm12900-201ENSMUST00000120919 573 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm2930-201ENSMUST00000170403 474 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm27828-201ENSMUST00000184108 119 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm29334-201ENSMUST00000190334 357 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm37495-201ENSMUST00000194590 264 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm43651-201ENSMUST00000199796 439 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm18597-201ENSMUST00000209519 694 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Vps28Q9D1C8 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm25765-201ENSMUST00000104100 132 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm16445-201ENSMUST00000120399 714 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm5646-201ENSMUST00000120568 714 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm14915-201ENSMUST00000120747 204 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm11896-201ENSMUST00000121105 820 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm13511-201ENSMUST00000121167 363 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm11982-201ENSMUST00000121480 314 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm13419-201ENSMUST00000121711 271 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm26028-201ENSMUST00000158660 294 ntBASIC3.95□□□□□ -1.78
Vps28Q9D1C8 Gm20415-201ENSMUST00000172877 423 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms