Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm4714-201ENSMUST00000203395 279 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm18791-201ENSMUST00000204611 726 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm45240-201ENSMUST00000211437 674 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm17890-201ENSMUST00000221419 757 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm17915-201ENSMUST00000222077 548 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm23932-201ENSMUST00000082914 107 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Mir202-201ENSMUST00000083568 72 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm22473-201ENSMUST00000104114 132 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm11432-201ENSMUST00000117334 231 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm14751-201ENSMUST00000117693 222 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm12697-201ENSMUST00000118008 667 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm15147-201ENSMUST00000122263 483 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm22166-201ENSMUST00000178419 121 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm23288-201ENSMUST00000179213 121 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm4842-201ENSMUST00000183237 835 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm23925-202ENSMUST00000188429 132 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm29647-201ENSMUST00000188795 666 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm21735-201ENSMUST00000190360 696 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm28504-201ENSMUST00000190977 666 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm35843-201ENSMUST00000193716 666 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm44376-201ENSMUST00000197570 128 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm43804-201ENSMUST00000198280 456 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm46190-201ENSMUST00000219650 427 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 AC173482.2-201ENSMUST00000224044 750 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Gm14797-201ENSMUST00000119378 1480 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.66□□□□□ -1.66
Ddx56Q9D0R4 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Ddx56Q9D0R4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm13046-201ENSMUST00000117391 501 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm14594-201ENSMUST00000118052 537 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm14590-201ENSMUST00000118934 537 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm15112-201ENSMUST00000120152 860 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm11692-201ENSMUST00000122121 902 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm23206-201ENSMUST00000122720 184 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm22968-201ENSMUST00000157955 118 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm15946-201ENSMUST00000160654 423 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm14596-201ENSMUST00000180268 537 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm14595-201ENSMUST00000180335 537 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Mir7056-201ENSMUST00000183776 59 ntBASIC4.65□□□□□ -1.67
Ddx56Q9D0R4 Gm28489-201ENSMUST00000186655 316 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms