Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm30674-201ENSMUST00000214523 392 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm18026-201ENSMUST00000222789 727 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm25126-201ENSMUST00000083343 102 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Mir190b-201ENSMUST00000104803 80 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm11408-201ENSMUST00000117889 519 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm11268-201ENSMUST00000118347 267 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm7618-201ENSMUST00000121643 171 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm5963-201ENSMUST00000143451 236 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm26320-201ENSMUST00000157742 306 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm22789-201ENSMUST00000157884 130 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm28655-201ENSMUST00000191538 692 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm43954-201ENSMUST00000204634 544 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm45439-201ENSMUST00000211723 359 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm45742-201ENSMUST00000212400 433 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm18557-201ENSMUST00000218710 433 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm10212-201ENSMUST00000087884 324 ntBASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Ddx28Q9CWT6 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm15151-201ENSMUST00000117106 177 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm15176-201ENSMUST00000117734 135 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm15195-201ENSMUST00000118775 263 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm14103-201ENSMUST00000119075 366 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm12118-201ENSMUST00000119766 532 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm12044-201ENSMUST00000120335 213 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm12543-201ENSMUST00000120410 543 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm12096-201ENSMUST00000121149 829 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm26001-201ENSMUST00000157989 103 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm23312-201ENSMUST00000158774 102 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm11394-201ENSMUST00000181421 517 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm27695-201ENSMUST00000184301 91 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm29299-201ENSMUST00000185609 923 ntBASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx28Q9CWT6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms