Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm14119-201ENSMUST00000119511 235 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm15060-201ENSMUST00000119550 948 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm9043-201ENSMUST00000119677 314 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm23602-201ENSMUST00000157258 132 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm22561-201ENSMUST00000157331 84 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm16101-201ENSMUST00000160695 430 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Mir7578-201ENSMUST00000183455 82 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm36934-201ENSMUST00000192007 306 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm9373-201ENSMUST00000208724 599 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm23628-201ENSMUST00000082464 173 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm26437-201ENSMUST00000082595 105 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.92□□□□□ -1.78
Smc1aQ9CU62 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm14775-201ENSMUST00000122089 310 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm24244-201ENSMUST00000157317 130 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm17194-201ENSMUST00000164610 348 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm20693-201ENSMUST00000177431 211 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm27715-201ENSMUST00000184714 260 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm20811-201ENSMUST00000190500 553 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm37698-201ENSMUST00000192605 463 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm44513-201ENSMUST00000206811 439 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm18242-201ENSMUST00000218455 542 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.91□□□□□ -1.78
Smc1aQ9CU62 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Smc1aQ9CU62 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.9□□□□□ -1.78
Smc1aQ9CU62 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.9□□□□□ -1.78
Smc1aQ9CU62 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.9□□□□□ -1.78
Smc1aQ9CU62 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Smc1aQ9CU62 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm25168-201ENSMUST00000104189 132 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm25560-201ENSMUST00000104606 176 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm11367-201ENSMUST00000117802 120 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm12509-201ENSMUST00000118033 609 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm14627-201ENSMUST00000118931 567 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm15026-201ENSMUST00000119219 458 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm12858-201ENSMUST00000121913 208 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm11575-201ENSMUST00000122243 228 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm23755-201ENSMUST00000157578 343 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm26141-201ENSMUST00000175299 126 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm27903-201ENSMUST00000175482 126 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm6113-201ENSMUST00000180319 639 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm28591-201ENSMUST00000185259 183 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms